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L3_105_000G1_scaffold_147

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Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_147_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60..974)
DNA (915bp) protein (305aa)
Elongation factor Ts n=3 Tax=Clostridiales RepID=H1C7J4_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tsf; elongation factor Ts
L3_105_000G1_scaffold_147_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1060..1788)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=2 Tax=Clostridiales RepID=H1C7J5_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpsB; 30S ribosomal protein S2
L3_105_000G1_scaffold_147_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2003..3196)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D1B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75232.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_000G1_scaffold_147_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3177..3677)
DNA (501bp) protein (167aa)
Sigma-70 region 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D6V2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55790.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_105_000G1_scaffold_147_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3806..4762)
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hprK; HPr kinase/phosphorylase (EC:2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=3 Tax=Clostridiales RepID=G9YX56_9FIRM
L3_105_000G1_scaffold_147_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4942..5130
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=3 Tax=Clostridiales RepID=G9YX58_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rpmB; 50S ribosomal protein L28
L3_105_000G1_scaffold_147_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5230..5706
DNA (477bp) protein (159aa)
Copper/zinc superoxide dismutase n=2 Tax=Clostridiales RepID=G9YX59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35444.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
superoxide dismutase copper/zinc binding protein
L3_105_000G1_scaffold_147_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5776..7806)
DNA (2031bp) protein (677aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35445.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative surface layer protein
L3_105_000G1_scaffold_147_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7825..9006)
DNA (1182bp) protein (394aa)
Efflux ABC transporter, permease protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX61_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHM37899.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative drug efflux ABC transporter permease protein
L3_105_000G1_scaffold_147_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9003..9734)
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2D6X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35447.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative drug efflux ABC transporter ATP-binding protein
L3_105_000G1_scaffold_147_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9750..11561)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM37901.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative drug efflux protein
L3_105_000G1_scaffold_147_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11758..12435
DNA (678bp) protein (226aa)
Putative response regulator MprA n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX64_9FIRM
Putative response regulator MprA {ECO:0000313|EMBL:EHM37902.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
response regulator receiver
L3_105_000G1_scaffold_147_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12432..13688
DNA (1257bp) protein (419aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
dltS; sensor protein DltS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YX65_9FIRM
L3_105_000G1_scaffold_147_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13767..14162
DNA (396bp) protein (132aa)
Thioesterase family protein n=2 Tax=Clostridiales RepID=G9YX66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35451.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Thioesterase superfamily
L3_105_000G1_scaffold_147_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14164..14637
DNA (474bp) protein (158aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY46_9CLOT
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:ERI77150.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_147_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14714..15301
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55802.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_000G1_scaffold_147_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15421..16176
DNA (756bp) protein (252aa)
Transcriptional regulator, LuxR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55803.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator, LuxR family
L3_105_000G1_scaffold_147_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16180..17367
DNA (1188bp) protein (396aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZC5_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI77153.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_147_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17420..18085)
DNA (666bp) protein (222aa)
Radical SAM-linked protein n=3 Tax=Clostridiales RepID=G9YX71_9FIRM
Radical SAM-linked protein {ECO:0000313|EMBL:EHO35457.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_147_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18072..19913)
DNA (1842bp) protein (614aa)
Radical SAM domain protein n=3 Tax=Clostridiales RepID=G9YX72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35458.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
radical SAM protein
L3_105_000G1_scaffold_147_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20030..21244)
DNA (1215bp) protein (405aa)
Citrate transporter n=2 Tax=Clostridiales RepID=U2D6R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35459.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transporter, YbiR family
L3_105_000G1_scaffold_147_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21303..21509)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YX75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI77158.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_000G1_scaffold_147_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21774..22538
DNA (765bp) protein (255aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YX77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35461.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
helix-turn-helix domain-containing protein
L3_105_000G1_scaffold_147_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22699..24462
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35462.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_147_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24492..25208)
DNA (717bp) protein (239aa)
Endopeptidase Clp n=3 Tax=Clostridiales RepID=G9YX79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35463.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
S14 family peptidase
L3_105_000G1_scaffold_147_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25287..26675)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D6R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55812.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_105_000G1_scaffold_147_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26683..27162)
DNA (480bp) protein (160aa)
Sigma-70 region 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZD6_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:ERI77163.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_105_000G1_scaffold_147_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27268..27621)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BGB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77164.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Sporulation initiation factor Spo0A C terminal.
L3_105_000G1_scaffold_147_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27637..27912)
DNA (276bp) protein (92aa)
Restriction-modification system control element Bcll family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY62_9CLOT
Restriction-modification system control element Bcll family protein {ECO:0000313|EMBL:ERI77165.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_147_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28077..29483)
DNA (1407bp) protein (469aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=2 Tax=Clostridiales RepID=H1C7M4_9FIRM
Displaying items 1-30 of 115 in total

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