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L3_105_000G1_scaffold_161

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Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_161_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..591
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1A4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17941.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_161_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

735..1892
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BT54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43655.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_105_000G1_scaffold_161_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2371..2655
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67420.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_105_000G1_scaffold_161_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2832..3641)
DNA (810bp) protein (270aa)
Cof-like hydrolase n=3 Tax=Lachnospiraceae RepID=A7B1A5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43653.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_000G1_scaffold_161_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3645..5015)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=3 Tax=Lachnospiraceae RepID=A7B1A6_RUMGN
L3_105_000G1_scaffold_161_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..6098)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=4 Tax=Clostridiales RepID=A7B1A7_RUMGN
L3_105_000G1_scaffold_161_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6113..7561)
DNA (1449bp) protein (483aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=4 Tax=Clostridiales RepID=A7B1A8_RUMGN
L3_105_000G1_scaffold_161_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7582..8316)
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=3 Tax=Lachnospiraceae RepID=A7B1A9_RUMGN
L3_105_000G1_scaffold_161_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8487..8921
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BS70_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43648.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_161_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8931..10493
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRY4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17933.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LysM domain.
L3_105_000G1_scaffold_161_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10574..11449
DNA (876bp) protein (292aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Lachnospiraceae RepID=F7JTH5_9FIRM
L3_105_000G1_scaffold_161_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11451..12122
DNA (672bp) protein (224aa)
FCD domain protein n=3 Tax=Lachnospiraceae RepID=A7B1B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43645.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, GntR family
L3_105_000G1_scaffold_161_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12232..12858
DNA (627bp) protein (209aa)
Stage II sporulation protein R n=2 Tax=Lachnospiraceae RepID=V8BT29_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43644.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
stage II sporulation protein R
L3_105_000G1_scaffold_161_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12886..14064
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BS54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43643.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
cation diffusion facilitator family transporter
L3_105_000G1_scaffold_161_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14006..14797
DNA (792bp) protein (264aa)
Acyl-ACP thioesterase (EC:3.1.2.14)
Acyl-ACP thioesterase n=2 Tax=Clostridiales RepID=A7B1B6_RUMGN
Acyl-ACP thioesterase {ECO:0000313|EMBL:EDN78038.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_105_000G1_scaffold_161_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14844..15665
DNA (822bp) protein (274aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TNS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17927.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_161_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15736..15972
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1B8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17926.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_161_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16089..19562
DNA (3474bp) protein (1158aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BT16_RUMGN
L3_105_000G1_scaffold_161_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19647..20660
DNA (1014bp) protein (338aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=4 Tax=Clostridiales RepID=A7B1C0_RUMGN
L3_105_000G1_scaffold_161_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20673..21503
DNA (831bp) protein (277aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=4 Tax=Clostridiales RepID=A7B1C1_RUMGN
L3_105_000G1_scaffold_161_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21514..21975
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1C2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17922.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_161_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22022..22474)
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1C3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43635.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Protein of unknown function (DUF1628).
L3_105_000G1_scaffold_161_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22634..24112
DNA (1479bp) protein (493aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
cardiolipin synthetase 2 (EC:2.7.8.-)
Cardiolipin synthase n=2 Tax=Ruminococcus gnavus RepID=A7B1C4_RUMGN
L3_105_000G1_scaffold_161_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24250..25422
DNA (1173bp) protein (391aa)
Trigger factor n=3 Tax=Clostridiales RepID=F7JTG1_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
trigger factor
L3_105_000G1_scaffold_161_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25534..26406
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=3 Tax=Lachnospiraceae RepID=A7B1C6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43631.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Galactose mutarotase and related enzymes
L3_105_000G1_scaffold_161_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26416..27789
DNA (1374bp) protein (458aa)
MATE efflux family protein n=3 Tax=Lachnospiraceae RepID=A7B1C7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17917.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
MATE efflux family protein
L3_105_000G1_scaffold_161_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27835..28290
DNA (456bp) protein (152aa)
Peroxiredoxin (EC:1.11.1.15)
Antioxidant, AhpC/TSA family n=3 Tax=Lachnospiraceae RepID=A7B1C8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17916.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_105_000G1_scaffold_161_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28576..29406
DNA (831bp) protein (277aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1D0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43628.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_161_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30050..31021
DNA (972bp) protein (324aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1D1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43627.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein (putative transposase or invertase)
L3_105_000G1_scaffold_161_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31176..31928)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRU5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43626.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative glycosyl hydrolase
Displaying items 1-30 of 130 in total

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