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L3_105_000G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_165_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(330..842)
DNA (513bp) protein (171aa)
Nitroreductase {ECO:0000313|EMBL:CKH78245.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH78245.1};; Putative nitroreductase {ECO:0000313|EMBL:CEJ96729.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Nitroreductase family protein n=8 Tax=Clostridium difficile RepID=G6BT85_CLODI
putative nitroreductase
L3_105_000G1_scaffold_165_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1292..1768
DNA (477bp) protein (159aa)
Phosphoribosylaminoimidazole carboxylase catalytic subunit {ECO:0000313|EMBL:CAJ67039.1}; EC=4.1.1.21 {ECO:0000313|EMBL:CAJ67039.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=187 Tax=Clostridium difficile RepID=C9XIY7_CLODC
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
L3_105_000G1_scaffold_165_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1774..2472
DNA (699bp) protein (233aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=216 Tax=Clostridium difficile RepID=C9XIY8_CLODC
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase
L3_105_000G1_scaffold_165_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2484..3851
DNA (1368bp) protein (456aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Amidophosphoribosyltransferase n=210 Tax=Clostridium difficile RepID=C9XIY9_CLODC
amidophosphoribosyltransferase
L3_105_000G1_scaffold_165_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3845..4921
DNA (1077bp) protein (359aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=93 Tax=Clostridium difficile RepID=C9XIZ0_CLODC
purG; phosphoribosylformylglycinamidine cyclo-ligase
L3_105_000G1_scaffold_165_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4915..5508
DNA (594bp) protein (198aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:CAJ67043.1}; EC=2.1.2.2 {ECO:0000313|EMBL:CAJ67043.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Phosphoribosylglycinamide formyltransferase n=145 Tax=Clostridium difficile RepID=C9XIZ1_CLODC
purN; phosphoribosylglycinamide formyltransferase
L3_105_000G1_scaffold_165_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5501..7033
DNA (1533bp) protein (511aa)
purH; Bifunctional purine biosynthesis protein purH[Includes: Phosphoribosylaminoimidazolecarboxamideformyltransferase ; IMP cyclohydrolase] (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=120 Tax=Clostridium difficile RepID=PUR9_CLOD6
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_105_000G1_scaffold_165_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7044..8294
DNA (1251bp) protein (417aa)
purD; Phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000313|EMBL:CAJ67045.1}; EC=6.3.4.13 {ECO:0000313|EMBL:CAJ67045.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Phosphoribosylamine--glycine ligase n=136 Tax=Clostridium difficile RepID=T3IHN0_CLODC
L3_105_000G1_scaffold_165_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8319..12125
DNA (3807bp) protein (1269aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EQE70233.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EQE70233.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
purL; Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=7 Tax=Clostridium difficile RepID=T2WZ00_CLODI
L3_105_000G1_scaffold_165_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12331..13203
DNA (873bp) protein (291aa)
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDS83290.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CDS83290.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
dTDP-4-dehydrorhamnose reductase n=27 Tax=Clostridium difficile RepID=G6BT76_CLODI
dtdp-4-dehydrorhamnose reductase
L3_105_000G1_scaffold_165_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13312..14181
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Glucose-1-phosphate thymidylyltransferase n=155 Tax=Clostridium difficile RepID=G6BT75_CLODI
glucose-1-phosphate thymidylyltransferase
L3_105_000G1_scaffold_165_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14230..14787
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EQG78562.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EQG78562.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=176 Tax=Clostridium difficile RepID=G6BT74_CLODI
L3_105_000G1_scaffold_165_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14825..15808
DNA (984bp) protein (328aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BT73_CLODI
dtdp-glucose 4,6-dehydratase
L3_105_000G1_scaffold_165_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15784..16506
DNA (723bp) protein (241aa)
Transglycosylase SLT domain protein n=2 Tax=Clostridium difficile RepID=G6BT72_CLODI
transglycosylase
Putative transglycosylase {ECO:0000313|EMBL:CBE01852.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_105_000G1_scaffold_165_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16515..16943
DNA (429bp) protein (143aa)
Uncharacterized protein n=163 Tax=Clostridium difficile RepID=C9XJ00_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22027.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_105_000G1_scaffold_165_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16967..17281
DNA (315bp) protein (105aa)
Surface presentation of antigens family protein n=122 Tax=Clostridium difficile RepID=T2UKJ3_CLODI
Flagellar motor switch protein FliN {ECO:0000313|EMBL:CCL22028.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
fliN; flagellar motor switch protein
L3_105_000G1_scaffold_165_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17433..17708
DNA (276bp) protein (92aa)
Flagellar biosynthesis anti-sigma factor FlgM n=156 Tax=Clostridium difficile RepID=G6BT69_CLODI
negative regulator of flagellin synthesis
Negative regulator of flagellin synthesis (Anti-sigma-d factor) {ECO:0000313|EMBL:CCL22029.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_105_000G1_scaffold_165_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17713..18129
DNA (417bp) protein (139aa)
Uncharacterized protein n=76 Tax=Clostridium difficile RepID=G6BT68_CLODI
FlgN family protein {ECO:0000313|EMBL:EQG78642.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
flagellar biosynthesis protein
L3_105_000G1_scaffold_165_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18147..19457
DNA (1311bp) protein (437aa)
Flagellar hook-associated protein FlgK n=147 Tax=Clostridium difficile RepID=G6BT67_CLODI
Flagellar hook-associated protein FlgK (Or HAP1) {ECO:0000313|EMBL:CCL22031.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
flgK; flagellar hook-associated protein
L3_105_000G1_scaffold_165_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19476..20408
DNA (933bp) protein (311aa)
Flagellar hook-associated protein 3 n=175 Tax=Clostridium difficile RepID=G6BT66_CLODI
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:EQE70232.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
flgL; flagellar hook-associated protein
L3_105_000G1_scaffold_165_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20424..20816
DNA (393bp) protein (131aa)
Flagellar assembly factor FliW n=17 Tax=Clostridium difficile RepID=C9XJ06_CLODC
hypothetical protein
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_105_000G1_scaffold_165_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20810..21022
DNA (213bp) protein (71aa)
Carbon storage regulator homolog n=187 Tax=Clostridium difficile RepID=C9XJ07_CLODC
csrA; carbon storage regulator
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_105_000G1_scaffold_165_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21044..21439
DNA (396bp) protein (132aa)
Flagellar protein FliS n=6 Tax=Clostridium difficile RepID=G6BT63_CLODI
fliS1; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:CBE01868.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_105_000G1_scaffold_165_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21439..21795
DNA (357bp) protein (119aa)
Flagellar protein FliS n=84 Tax=Clostridium difficile RepID=T2V6Y1_CLODI
Flagellar protein FliS2 {ECO:0000313|EMBL:CDS83177.1}; Putative flagellar protein FliS {ECO:0000313|EMBL:CDS83312.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
fliS2; flagellar protein
L3_105_000G1_scaffold_165_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21816..23339
DNA (1524bp) protein (508aa)
Flagellar hook-associated protein 2 n=8 Tax=Clostridium difficile RepID=G6BT61_CLODI
Flagellar hook-associated protein 2 FliD (Or HAP2) {ECO:0000313|EMBL:CCL22037.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
flagellar cap protein
L3_105_000G1_scaffold_165_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23342..23677
DNA (336bp) protein (112aa)
Uncharacterized protein n=147 Tax=Clostridium difficile RepID=G6BT60_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22038.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_105_000G1_scaffold_165_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23692..24651
DNA (960bp) protein (320aa)
Flagellin C n=148 Tax=Clostridium difficile RepID=U3W630_CLODI
Flagellin C {ECO:0000313|EMBL:CCL22039.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
fliC; flagellin subunit
L3_105_000G1_scaffold_165_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24744..26885
DNA (2142bp) protein (714aa)
Glycosyltransferase {ECO:0000313|EMBL:CCL22040.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCL22040.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Glycosyltransferase, group 2 family protein n=8 Tax=Clostridium difficile RepID=G6BT58_CLODI
glycosyltransferase
L3_105_000G1_scaffold_165_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26909..28786
DNA (1878bp) protein (626aa)
Glycosyltransferase, group 2 family protein n=122 Tax=Clostridium difficile RepID=G6BT57_CLODI
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCL22041.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
glycosyl transferase group 2 family protein
L3_105_000G1_scaffold_165_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28779..30893
DNA (2115bp) protein (705aa)
Glycosyl transferase, group 2 family n=84 Tax=Clostridium difficile RepID=U4BXU8_CLODI
Glycosyl transferase, group 2 family {ECO:0000313|EMBL:CCL22042.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
glycosyl transferase group 2 family protein
Displaying items 1-30 of 107 in total

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