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L3_105_000G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_232_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

322..1296
DNA (975bp) protein (325aa)
Glycosyl hydrolase family 25 n=5 Tax=Clostridiales RepID=A5KPV8_9FIRM
Glycosyl hydrolase, family 25 {ECO:0000313|EMBL:EFV19748.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
glycosyl hydrolases 25 family protein
L3_105_000G1_scaffold_232_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1660..2079)
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19747.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000G1_scaffold_232_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2173..2592)
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25992.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2625..3182)
DNA (558bp) protein (186aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QBL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25993.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
TetR family transcriptional regulator
L3_105_000G1_scaffold_232_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3425..9325)
DNA (5901bp) protein (1967aa)
LPXTG-motif cell wall anchor domain protein n=3 Tax=Clostridiales RepID=A5KPV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25994.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
alpha-L-fucosidase
L3_105_000G1_scaffold_232_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9602..10381)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QBA9_9FIRM
L3_105_000G1_scaffold_232_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10353..11168)
DNA (816bp) protein (272aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KPV1_9FIRM
Membrane protein {ECO:0000313|EMBL:EFV19742.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000G1_scaffold_232_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11279..12481)
DNA (1203bp) protein (401aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=3 Tax=Lachnospiraceae RepID=A5KPV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19741.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000G1_scaffold_232_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12619..13245)
DNA (627bp) protein (209aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25997.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
formate/nitrite transporter
L3_105_000G1_scaffold_232_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13807..13899
DNA (93bp) protein (31aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QBP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85428.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_105_000G1_scaffold_232_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14127..15158)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25999.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15155..15715)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=5 Tax=Clostridiales RepID=E5XG73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85430.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_105_000G1_scaffold_232_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16104..17129)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=5 Tax=Clostridiales RepID=A5KPU6_9FIRM
L3_105_000G1_scaffold_232_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17172..19616)
DNA (2445bp) protein (815aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AV61_9FIRM
phenylalanyl-tRNA synthetase subunit beta
L3_105_000G1_scaffold_232_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19645..20682)
DNA (1038bp) protein (346aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Clostridiales RepID=A5KPU4_9FIRM
phenylalanyl-tRNA synthetase subunit alpha
L3_105_000G1_scaffold_232_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21254..21721)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26004.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21726..22142)
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26005.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22239..22757)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QUX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26006.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22834..24783)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QZ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26007.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
membrane protein
L3_105_000G1_scaffold_232_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24877..25401)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QBR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26008.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25462..25779)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26009.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000G1_scaffold_232_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25803..26264)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26010.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000G1_scaffold_232_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26236..26598)
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26011.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26805..27098)
DNA (294bp) protein (98aa)
WXG100 family type VII secretion target n=3 Tax=Lachnospiraceae RepID=A5KPT5_9FIRM
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000G1_scaffold_232_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27157..31680)
DNA (4524bp) protein (1508aa)
Type VII secretion protein EssC n=3 Tax=Clostridiales RepID=R5QZ87_9FIRM
Type VII secretion protein EssC {ECO:0000313|EMBL:CCZ26012.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L3_105_000G1_scaffold_232_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31768..32016)
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26013.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
YukD.
L3_105_000G1_scaffold_232_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32065..33123)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26014.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L3_105_000G1_scaffold_232_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33139..34056)
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QBI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19721.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized conserved protein, contains FHA domain
L3_105_000G1_scaffold_232_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34096..35682)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QUY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26016.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_232_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36017..37915)
DNA (1899bp) protein (633aa)
Kinase domain protein n=3 Tax=Lachnospiraceae RepID=A5KPS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19719.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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