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L3_105_000G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_272_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

L3_105_000G1_scaffold_272_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99..1328)
DNA (1230bp) protein (410aa)
Serine proteinase inhibitor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW3_9FIRM
Serine proteinase inhibitor {ECO:0000313|EMBL:EHM50677.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000G1_scaffold_272_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1475..2176
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32662.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_105_000G1_scaffold_272_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2226..4328
DNA (2103bp) protein (701aa)
Histidine kinase A domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D101_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56666.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4456..4695)
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=3 Tax=Clostridiales RepID=G9YQW0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpsR; 30S ribosomal protein S18
L3_105_000G1_scaffold_272_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4775..5263)
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=3 Tax=Clostridiales RepID=G9YQV9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ssb; single-stranded DNA-binding protein
L3_105_000G1_scaffold_272_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5280..5579)
DNA (300bp) protein (100aa)
30S ribosomal protein S6 n=3 Tax=Clostridiales RepID=G9YQV8_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpsF; 30S ribosomal protein S6
L3_105_000G1_scaffold_272_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5810..6613
DNA (804bp) protein (268aa)
Peptidase propeptide and YPEB domain protein n=3 Tax=Clostridiales RepID=G9YQ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32668.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6689..7597)
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=U2D7I9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32669.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulator
L3_105_000G1_scaffold_272_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7730..8674
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56660.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8693..10684
DNA (1992bp) protein (664aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56659.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10996..11877)
DNA (882bp) protein (294aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Clostridiales RepID=G9YSA6_9FIRM
L3_105_000G1_scaffold_272_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11920..12441)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AR99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62640.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_272_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12662..13930)
DNA (1269bp) protein (423aa)
Putative guanine deaminase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ATD3_9CLOT
Putative guanine deaminase {ECO:0000313|EMBL:ERI62643.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_272_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14259..15638)
DNA (1380bp) protein (460aa)
GumN protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AA18_9CLOT
GumN protein {ECO:0000313|EMBL:ERI62644.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
GumN family protein
L3_105_000G1_scaffold_272_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15847..16095
DNA (249bp) protein (83aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YSA0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI62645.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L3_105_000G1_scaffold_272_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16598..17797)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=G9YS98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32520.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AAA+-like ATPase
L3_105_000G1_scaffold_272_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17973..18515
DNA (543bp) protein (181aa)
Putative stage V sporulation protein T n=2 Tax=Clostridiales RepID=G9YS97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56705.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoVT; transcriptional regulator spoVT
L3_105_000G1_scaffold_272_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18623..19780)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2B4V0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32430.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20049..21992
DNA (1944bp) protein (648aa)
VanW-like protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS94_9FIRM
VanW-like protein {ECO:0000313|EMBL:EHM46460.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative hydrolase
L3_105_000G1_scaffold_272_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22242..22919
DNA (678bp) protein (226aa)
TIGR02453 family protein n=2 Tax=Clostridiales RepID=G9YS93_9FIRM
TIGR02453 family protein {ECO:0000313|EMBL:ERI70865.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000G1_scaffold_272_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22995..23765
DNA (771bp) protein (257aa)
Polysaccharide deacetylase n=2 Tax=Clostridiales RepID=G9YS92_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:ERI70866.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative polysaccharide deacetylase
L3_105_000G1_scaffold_272_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23807..24760)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56700.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_000G1_scaffold_272_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24777..25631)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32435.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
metal-dependent membrane protease
L3_105_000G1_scaffold_272_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25769..28099
DNA (2331bp) protein (777aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFT0_9FIRM
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EHO32436.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000G1_scaffold_272_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28686..28901)
DNA (216bp) protein (72aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2CWV4_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI71741.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Helix-turn-helix.
L3_105_000G1_scaffold_272_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28985..29218
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32438.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000G1_scaffold_272_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29139..30623)
DNA (1485bp) protein (495aa)
Putative type VII secretion AAA-ATPase EccA n=3 Tax=Clostridiales RepID=G9YSU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32439.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPases of the AAA+ class
L3_105_000G1_scaffold_272_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30801..31781
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32440.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ig domain-containing protein
L3_105_000G1_scaffold_272_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32156..33814)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YSU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32441.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribonuclease J
Displaying items 1-30 of 78 in total

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