ggKbase home page

L3_105_000G1_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_316_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(108..1835)
DNA (1728bp) protein (576aa)
B12 binding domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFK8_9FIRM
B12 binding domain protein {ECO:0000313|EMBL:CDB45354.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
protein of unknown function DUF4080
L3_105_000G1_scaffold_316_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1919..3736
DNA (1818bp) protein (606aa)
Oligoendopeptidase F n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7N4_9FIRM
Oligoendopeptidase F {ECO:0000313|EMBL:CDB45355.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
oligoendopeptidase F
L3_105_000G1_scaffold_316_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3845..4222)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45356.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_316_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4243..5805)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45357.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_316_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5936..6853)
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I586_9FIRM
L3_105_000G1_scaffold_316_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6846..7184)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45359.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_316_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7250..8299)
DNA (1050bp) protein (350aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
D-Ala-D-Ala dipeptidase domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7N9_9FIRM
peptidase M15D vanX D-ala-D-ala dipeptidase
L3_105_000G1_scaffold_316_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8296..9075)
DNA (780bp) protein (260aa)
Hydrolase carbon-nitrogen family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ35_9FIRM
Hydrolase carbon-nitrogen family {ECO:0000313|EMBL:CDB45361.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
amidohydrolase
L3_105_000G1_scaffold_316_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9072..9590)
DNA (519bp) protein (173aa)
HAD phosphatase family IIIA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4X5_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CDB45362.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L3_105_000G1_scaffold_316_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9584..11110)
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I591_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_105_000G1_scaffold_316_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11103..11801)
DNA (699bp) protein (233aa)
Transcriptional regulatory protein ResD n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFL9_9FIRM
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:CDB45364.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
two component transcriptional regulator, winged helix family
L3_105_000G1_scaffold_316_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11988..12656)
DNA (669bp) protein (223aa)
NlpC/P60 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7P4_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDB45365.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
NLP/P60 protein
L3_105_000G1_scaffold_316_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12722..13651)
DNA (930bp) protein (310aa)
Bactoprenol glucosyl transferase-like protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ38_9FIRM
Bactoprenol glucosyl transferase-like protein {ECO:0000313|EMBL:CDB45366.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
family 2 glycosyl transferase
L3_105_000G1_scaffold_316_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14169..15092)
DNA (924bp) protein (308aa)
HDIG domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4Y2_9FIRM
HDIG domain protein {ECO:0000313|EMBL:CDB45367.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
metal dependent phosphohydrolase
L3_105_000G1_scaffold_316_15
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15122..15916)
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6IDT6_9FIRM
hypothetical protein
L3_105_000G1_scaffold_316_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15897..16595)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I596_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45368.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_316_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16722..17969)
DNA (1248bp) protein (416aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Peptidase T n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFM4_9FIRM
peptidase T
L3_105_000G1_scaffold_316_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17992..19542)
DNA (1551bp) protein (517aa)
Efflux pump component MtrF n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7P7_9FIRM
Efflux pump component MtrF {ECO:0000313|EMBL:CDB45370.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_316_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19705..20484)
DNA (780bp) protein (260aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ41_9FIRM
L3_105_000G1_scaffold_316_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20477..21661)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Tryptophan synthase beta chain n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4Y8_9FIRM
tryptophan synthase subunit beta
L3_105_000G1_scaffold_316_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21654..22280)
DNA (627bp) protein (209aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5A3_9FIRM
L3_105_000G1_scaffold_316_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22273..23058)
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFM8_9FIRM
Indole-3-glycerol phosphate synthase
L3_105_000G1_scaffold_316_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23067..24074)
DNA (1008bp) protein (336aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7Q1_9FIRM
anthranilate phosphoribosyltransferase
L3_105_000G1_scaffold_316_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24090..24656)
DNA (567bp) protein (189aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ44_9FIRM
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:CDB45376.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
glutamine amidotransferase of anthranilate synthase
L3_105_000G1_scaffold_316_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24671..26131)
DNA (1461bp) protein (487aa)
anthranilate synthase (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4Z1_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:CDB45377.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_316_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26598..27350)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45378.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_316_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27471..28262)
DNA (792bp) protein (264aa)
pheC; putative cyclohexadienyl dehydratase (EC:4.2.1.51 4.2.1.91)
Putative cyclohexadienyl dehydratase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFN4_9FIRM
Putative cyclohexadienyl dehydratase {ECO:0000313|EMBL:CDB45379.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_316_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28538..29395
DNA (858bp) protein (286aa)
4Fe-4S binding domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7Q7_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB45380.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
4Fe-4S ferredoxin
L3_105_000G1_scaffold_316_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29508..30014
DNA (507bp) protein (169aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ48_9FIRM
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:CDB45381.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
alkyl hydroperoxide reductase
L3_105_000G1_scaffold_316_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30070..31551)
DNA (1482bp) protein (494aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3)
Aldehyde dehydrogenase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4Z6_9FIRM
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDB45382.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Displaying items 1-30 of 70 in total

View Taxonomy