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L3_105_000G1_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_330_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(242..721)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Ferritin n=15 Tax=Bacteroides RepID=FTN_BACF6
ftnA; ferritin A
L3_105_000G1_scaffold_330_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(859..2022)
DNA (1164bp) protein (388aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Diaminopimelate decarboxylase n=9 Tax=Bacteroides RepID=E1WS51_BACF6
putative diaminopimelate decarboxylase
L3_105_000G1_scaffold_330_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2179..3498)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Aspartokinase n=14 Tax=Bacteroides RepID=E1WS52_BACF6
putative aspartokinase III
L3_105_000G1_scaffold_330_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3530..4228)
DNA (699bp) protein (233aa)
Cell division ATP-binding protein n=3 Tax=Bacteroides RepID=E1WS53_BACF6
ftsE; Cell division ATP-binding protein
Cell division ATP-binding protein {ECO:0000313|EMBL:CBW23383.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_330_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4213..4824)
DNA (612bp) protein (204aa)
Histidine biosynthesis bifunctional protein HisIE n=16 Tax=Bacteroides RepID=E1WS54_BACF6
phosphoribosyl-ATP pyrophosphohydrolase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_105_000G1_scaffold_330_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5013..5765)
DNA (753bp) protein (251aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Imidazole glycerol phosphate synthase subunit HisF n=10 Tax=Bacteroides RepID=E1WS55_BACF6
hisF; imidazole glycerol phosphate synthase subunit
L3_105_000G1_scaffold_330_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5867..6586)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bacteroides RepID=E1WS56_BACF6
hisA; imidazole-4-carboxamide isomerase
L3_105_000G1_scaffold_330_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6626..7216)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
Imidazole glycerol phosphate synthase subunit HisH n=6 Tax=Bacteroides RepID=HIS5_BACFR
hisH; imidazole glycerol phosphate synthase subunit
L3_105_000G1_scaffold_330_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8243..10318)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS58_BACF6
Uncharacterized protein {ECO:0000313|EMBL:EXY73745.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L3_105_000G1_scaffold_330_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11271..11678)
DNA (408bp) protein (136aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WS60_BACF6
hypothetical protein
Putative general stress protein {ECO:0000313|EMBL:EYE46565.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_105_000G1_scaffold_330_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11888..12709)
DNA (822bp) protein (274aa)
Transcriptional regulator n=10 Tax=Bacteroides RepID=Q64RS5_BACFR
putative regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXZ43734.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_105_000G1_scaffold_330_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12916..13269)
DNA (354bp) protein (118aa)
Putative regulatory protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS62_BACF6
Putative regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CBW23392.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_330_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13605..14819)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS63_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW23393.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_330_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15580..19341)
DNA (3762bp) protein (1254aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS64_BACF6
Uncharacterized protein {ECO:0000313|EMBL:CBW23394.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
hypothetical protein
L3_105_000G1_scaffold_330_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19366..21945)
DNA (2580bp) protein (860aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1FUH4_BACFG
Putative exported hydrolase {ECO:0000313|EMBL:CBW23395.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative exported hydrolase
L3_105_000G1_scaffold_330_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21964..22968)
DNA (1005bp) protein (335aa)
Methylcobamide:CoM methyltransferase MtbA n=2 Tax=Bacteroides fragilis RepID=Q64RS0_BACFR
putative uroporphirinogen biosynthesis-related protein
Methylcobamide:CoM methyltransferase MtbA {ECO:0000313|EMBL:BAD49811.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_000G1_scaffold_330_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22977..23660)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6ZSY3_9BACE
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EXY26886.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
putative 5-methyltetrahydrofolate-homocystein methyltransferase
L3_105_000G1_scaffold_330_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23662..24297)
DNA (636bp) protein (212aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=4 Tax=Bacteroides RepID=C6I6E9_9BACE
putative dimethylamine corrinoid protein
Methanosarcina family methyltransferase cognate corrinoid protein {ECO:0000313|EMBL:EIY45291.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_000G1_scaffold_330_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24321..25571)
DNA (1251bp) protein (417aa)
Putative methyltransferase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS69_BACF6
putative methyltransferase
Uroporphyrinogen decarboxylase family protein {ECO:0000313|EMBL:EXY26888.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
L3_105_000G1_scaffold_330_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25585..28170)
DNA (2586bp) protein (862aa)
Putative exported hydrolase n=2 Tax=Bacteroides RepID=E1WS70_BACF6
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EXZ82476.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
putative exported hydrolase
L3_105_000G1_scaffold_330_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28342..30030)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WS71_BACF6
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXY89911.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_105_000G1_scaffold_330_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30051..33386)
DNA (3336bp) protein (1112aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS72_BACF6
Putative exported protein {ECO:0000313|EMBL:CBW23402.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
hypothetical protein
L3_105_000G1_scaffold_330_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33517..34542)
DNA (1026bp) protein (342aa)
Putative membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS73_BACF6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBW23403.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_330_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34758..35354)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, expansion family 1 n=8 Tax=Bacteroides fragilis RepID=I3HLP8_BACFG
putative ECF sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD49819.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_000G1_scaffold_330_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35752..36345
DNA (594bp) protein (198aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WS75_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA85474.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_105_000G1_scaffold_330_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36802..36915
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RR0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ52998.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_105_000G1_scaffold_330_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36926..37318)
DNA (393bp) protein (131aa)
Putative CTP pyrophosphohydrolase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS77_BACF6
putative CTP pyrophosphohydrolase
Putative CTP pyrophosphohydrolase {ECO:0000313|EMBL:CBW23407.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_330_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37469..38443
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G1M4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ82493.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L3_105_000G1_scaffold_330_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38642..39559
DNA (918bp) protein (306aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
Ribosomal RNA large subunit methyltransferase F n=4 Tax=Bacteroides RepID=E1WS79_BACF6
hypothetical protein
L3_105_000G1_scaffold_330_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39437..39709)
DNA (273bp) protein (91aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64RQ4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY45305.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
Displaying items 1-30 of 52 in total

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