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L3_105_000G1_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_340_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..955
DNA (954bp) protein (318aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Ribosomal protein L11 methyltransferase n=12 Tax=Bacteroides RepID=PRMA_BACFN
prmA; putative ribosomal protein L11 methyltransferase
L3_105_000G1_scaffold_340_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1032..1538)
DNA (507bp) protein (169aa)
Flavodoxin n=3 Tax=Bacteroides fragilis RepID=E1WTU3_BACF6
putative flavodoxin
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L3_105_000G1_scaffold_340_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1557..3593)
DNA (2037bp) protein (679aa)
Putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTU2_BACF6
putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits
Transketolase, pyrimidine binding domain protein {ECO:0000313|EMBL:EXY41552.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_105_000G1_scaffold_340_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3737..5104)
DNA (1368bp) protein (456aa)
Putative dihydrolipoamide acetyltransferase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTU1_BACF6
putative dihydrolipoamide acetyltransferase
Putative dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:CBW22164.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_340_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5612..6313)
DNA (702bp) protein (234aa)
Lipoyltransferase and lipoate-protein ligase n=4 Tax=Bacteroides RepID=I9VWT7_BACFG
lplA; putative lipoate-protein ligase
Biotin/lipoate A/B ligase family protein {ECO:0000313|EMBL:EXZ54324.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_105_000G1_scaffold_340_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6313..7662)
DNA (1350bp) protein (450aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Dihydrolipoyl dehydrogenase n=10 Tax=Bacteroides RepID=E1WTT9_BACF6
lpd; putative dihydrolipoamide dehydrogenase
L3_105_000G1_scaffold_340_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8227..8433
DNA (207bp) protein (69aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WTT8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY97797.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_000G1_scaffold_340_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8614..10206)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTT7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW22160.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_340_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10228..11883)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I3M2_9BACE
putative ATP/GTP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY97795.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_000G1_scaffold_340_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12336..13598
DNA (1263bp) protein (421aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E1WTT4_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84315.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_105_000G1_scaffold_340_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13704..14228)
DNA (525bp) protein (175aa)
Biotin carboxyl carrier protein n=7 Tax=Bacteroides RepID=Q64VW5_BACFR
putative biotin-requiring enzyme
HlyD secretion family protein {ECO:0000313|EMBL:EXZ54471.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_105_000G1_scaffold_340_12
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14242..15753)
DNA (1512bp) protein (504aa)
Putative biotin carboxylase 1 n=2 Tax=Bacteroides RepID=E1WTT2_BACF6
accC1; putative biotin carboxylase 1
Putative biotin carboxylase 1 {ECO:0000313|EMBL:CCZ40303.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L3_105_000G1_scaffold_340_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15772..17316)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I3M7_9BACE
putative propionyl-CoA carboxylase
Uncharacterized protein {ECO:0000313|EMBL:EKA84312.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_105_000G1_scaffold_340_14
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17578..18171
DNA (594bp) protein (198aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=I3HV18_BACFG
hypothetical protein
Conserved hypothetical exported protein {ECO:0000313|EMBL:CDD38162.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_105_000G1_scaffold_340_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18223..19671
DNA (1449bp) protein (483aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64VW9_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE53747.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_105_000G1_scaffold_340_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19876..21375
DNA (1500bp) protein (500aa)
Lactate permease (LctP) family transporter n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I3N0_9BACE
lctP; putative L-lactate permease
Transporter, lactate permease family protein {ECO:0000313|EMBL:EXY70730.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_105_000G1_scaffold_340_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21511..23103)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTS7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW22150.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_340_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23211..26339)
DNA (3129bp) protein (1043aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Bacteroides fragilis RepID=I3HV22_BACFG
Putative outer membrane receptor protein {ECO:0000313|EMBL:CBW22149.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative outer membrane receptor protein
L3_105_000G1_scaffold_340_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26941..27342
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q64VX3_BACFR
putative exported membrane protein
Uncharacterized protein {ECO:0000313|EMBL:BAD48353.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_000G1_scaffold_340_20
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27339..29585
DNA (2247bp) protein (749aa)
Biotin biosynthesis bifunctional protein BioAB n=2 Tax=Bacteroides RepID=BIOAB_BACF6
bioA; putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Biotin synthase {ECO:0000313|EMBL:EGN08772.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
L3_105_000G1_scaffold_340_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29724..30917
DNA (1194bp) protein (398aa)
Putative 8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:CBW22146.1}; EC=2.3.1.47 {ECO:0000313|EMBL:CBW22146.1};; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Putative 8-amino-7-oxononanoate synthase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTS3_BACF6
bioF; putative 8-amino-7-oxononanoate synthase
L3_105_000G1_scaffold_340_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30925..32397
DNA (1473bp) protein (491aa)
Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase;; EC=2.1.1.197;; Biotin synthesis protein BioC; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Malonyl-[acyl-carrier protein] O-methyltransferase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=BIOC_BACF6
putative biotin synthesis-related fusion protein
L3_105_000G1_scaffold_340_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32432..33073
DNA (642bp) protein (214aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTS1_BACF6
bioD; putative dethiobiotin synthetase
L3_105_000G1_scaffold_340_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33485..34840
DNA (1356bp) protein (452aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I3HV28_BACFG
putative NADH dehydrogenase
Putative NADH dehydrogenase {ECO:0000313|EMBL:BAD48348.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_000G1_scaffold_340_25
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35012..37432)
DNA (2421bp) protein (807aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I3HV29_BACFG
putative FtsX-related transmembrane transport protein
Uncharacterized protein {ECO:0000313|EMBL:CDD38173.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_105_000G1_scaffold_340_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37429..38121)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=5 Tax=Bacteroides RepID=D1JKQ3_9BACE
putative ABC transport system ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EXZ95105.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_105_000G1_scaffold_340_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38211..39458)
DNA (1248bp) protein (416aa)
Putative HlyD-family transporter component n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTR6_BACF6
putative HlyD-family transporter component
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EXY41526.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_105_000G1_scaffold_340_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39599..40918)
DNA (1320bp) protein (440aa)
Putative outer membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTR5_BACF6
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:CBW22138.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_340_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41199..42536
DNA (1338bp) protein (446aa)
Putative two-component response regulator transcriptional regulatory protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTR4_BACF6
putative two-component response regulator transcriptional regulatory protein
Putative two-component response regulator transcriptional regulatory protein {ECO:0000313|EMBL:CBW22137.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000G1_scaffold_340_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42542..43792
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Putative two-component system sensor histidine kinase protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WTR3_BACF6
putative two-component system sensor histidine kinase protein
Displaying items 1-30 of 97 in total

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