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L3_105_000G1_scaffold_370

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_370_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(93..980)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=3 Tax=Firmicutes RepID=E4LV33_9CLOT
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQJ56263.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
LysR family transcriptional regulator
L3_105_000G1_scaffold_370_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1032..1637
DNA (606bp) protein (202aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1BAD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27576.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_105_000G1_scaffold_370_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1634..2185
DNA (552bp) protein (184aa)
Chromate transport protein n=5 Tax=Firmicutes RepID=E4LV35_9CLOT
Chromate transporter family protein {ECO:0000313|EMBL:EQJ56261.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
chromate transporter
L3_105_000G1_scaffold_370_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2298..3731
DNA (1434bp) protein (478aa)
Aminoacyl-histidine dipeptidase n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAD4_9FIRM
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EHO27574.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
pepD; aminoacyl-histidine dipeptidase
L3_105_000G1_scaffold_370_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4026..4850
DNA (825bp) protein (275aa)
Transcriptional regulator, MerR family n=4 Tax=Firmicutes RepID=E4LV37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83796.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative transcriptional regulator
L3_105_000G1_scaffold_370_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5140..6528
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=4 Tax=Firmicutes RepID=E4LV38_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L3_105_000G1_scaffold_370_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6542..7609
DNA (1068bp) protein (356aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=5 Tax=Firmicutes RepID=E4LV39_9CLOT
L3_105_000G1_scaffold_370_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7606..8772
DNA (1167bp) protein (389aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Alanine racemase n=3 Tax=Firmicutes RepID=E4LV40_9CLOT
amino acid racemase
L3_105_000G1_scaffold_370_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8811..9857
DNA (1047bp) protein (349aa)
Acyltransferase n=3 Tax=Firmicutes RepID=E4LV41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83790.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_000G1_scaffold_370_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9872..11479
DNA (1608bp) protein (536aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BAC8_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:EQJ56253.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_370_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11585..12010)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BAC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56252.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted transcriptional regulators
L3_105_000G1_scaffold_370_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12544..12867)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B427_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83784.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_000G1_scaffold_370_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12888..13076)
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84236.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Protein of unknown function (DUF1703)/Predicted AAA-ATPase
L3_105_000G1_scaffold_370_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13323..14633
DNA (1311bp) protein (437aa)
pdaA; delta-lactam-biosynthetic de-N-acetylase (EC:3.5.-.-)
Delta-lactam-biosynthetic de-N-acetylase n=5 Tax=Firmicutes RepID=H1B425_9FIRM
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:ENY84237.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_370_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14724..15191
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BAC3_9FIRM
VanZ like family protein {ECO:0000313|EMBL:EQJ56247.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted integral membrane protein
L3_105_000G1_scaffold_370_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15229..15378)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NKK8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56246.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_370_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15534..16370
DNA (837bp) protein (279aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VVL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83772.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_105_000G1_scaffold_370_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16393..17175
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LV49_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFR37299.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_105_000G1_scaffold_370_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17168..17914
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=7 Tax=Firmicutes RepID=E4LV50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72042.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
glnQ; glutamine ABC transporter ATP-binding protein GlnQ
L3_105_000G1_scaffold_370_20
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18900..19736
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27559.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
inositol-1-monophosphatase
L3_105_000G1_scaffold_370_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19796..20302
DNA (507bp) protein (169aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VVL6_9FIRM
Phage transcriptional regulator, ArpU family {ECO:0000313|EMBL:EQJ56239.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_370_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20405..21457
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27557.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
glycosyltransferase
L3_105_000G1_scaffold_370_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21503..22576
DNA (1074bp) protein (358aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV56_9CLOT
TIGR00374 family protein {ECO:0000313|EMBL:EQJ56237.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_370_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22573..24552
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAB5_9FIRM
Regulatory protein RecX {ECO:0000256|SAAS:SAAS00093789}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
bifunctional group 1 glycosyl transferase/recombination regulator RecX
L3_105_000G1_scaffold_370_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24542..25495
DNA (954bp) protein (318aa)
HD domain protein n=4 Tax=Firmicutes RepID=E4LV58_9CLOT
OB-fold nucleic acid binding domain protein {ECO:0000313|EMBL:EQJ56235.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
metal dependent phosphohydrolase
L3_105_000G1_scaffold_370_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25683..27560
DNA (1878bp) protein (626aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Firmicutes RepID=E4LV59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83749.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_000G1_scaffold_370_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27573..28619
DNA (1047bp) protein (349aa)
M42 glutamyl aminopeptidase n=3 Tax=Firmicutes RepID=E4LV60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27552.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
ypdE; aminopeptidase ypdE
L3_105_000G1_scaffold_370_28
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28621..28944
DNA (324bp) protein (108aa)
PTS system, Lactose/Cellobiose specific IIA subunit n=5 Tax=Firmicutes RepID=E4LV61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72052.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
PTS system, Lactose/Cellobiose specific IIA subunit
L3_105_000G1_scaffold_370_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28946..29278
DNA (333bp) protein (111aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=7 Tax=Firmicutes RepID=E4LV62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84252.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system, Lactose/Cellobiose specific IIB subunit
L3_105_000G1_scaffold_370_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29435..30769
DNA (1335bp) protein (445aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=5 Tax=Firmicutes RepID=H1B410_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Displaying items 1-30 of 65 in total

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