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L3_105_000G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_393_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..985
DNA (984bp) protein (328aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=3 Tax=Bacteroidales RepID=D0THS3_9BACE
L3_105_000G1_scaffold_393_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


993..1478
DNA (486bp) protein (162aa)
50S ribosomal protein L17 n=2 Tax=Parabacteroides RepID=E1Z0F9_9PORP
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
rplQ; 50S ribosomal protein L17
L3_105_000G1_scaffold_393_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1659..2942
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=2 Tax=Parabacteroides RepID=E1Z0F8_9PORP
L3_105_000G1_scaffold_393_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3005..3370)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A6Q0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23684.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000G1_scaffold_393_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3345..4346)
DNA (1002bp) protein (334aa)
Kelch repeat protein n=2 Tax=Parabacteroides RepID=E1Z0F6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23685.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000G1_scaffold_393_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4618..5934
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XBL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30731.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000G1_scaffold_393_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5921..7126
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRD6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08513.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000G1_scaffold_393_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7216..7653)
DNA (438bp) protein (146aa)
LytTr DNA-binding domain protein n=2 Tax=Parabacteroides RepID=E1Z0F1_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFK60746.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
transcriptional regulator
L3_105_000G1_scaffold_393_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7777..8538)
DNA (762bp) protein (254aa)
LytTr DNA-binding domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THR4_9BACE
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEY82668.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
two-component system response regulator
L3_105_000G1_scaffold_393_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8535..9716)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZD74_9PORP
two-component system sensor protein histidine kinase
Putative two-component system sensor protein histidine kinase {ECO:0000313|EMBL:CDB50301.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_000G1_scaffold_393_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9861..11522
DNA (1662bp) protein (554aa)
Fimbrial assembly protein PilN n=2 Tax=Parabacteroides RepID=E1Z0E8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23693.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000G1_scaffold_393_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11648..13717
DNA (2070bp) protein (690aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XBM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24774.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_105_000G1_scaffold_393_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14556..18719
DNA (4164bp) protein (1388aa)
Leucine Rich Repeat protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBM8_9PORP
Leucine Rich Repeat protein {ECO:0000313|EMBL:EEU50228.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Ig-like domain-containing surface protein
L3_105_000G1_scaffold_393_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18725..20329
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0E1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60736.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000G1_scaffold_393_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(20515..20862)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=8 Tax=Bacteroidales RepID=RL19_PARD8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_000G1_scaffold_393_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21000..22016)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LEF1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44065.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000G1_scaffold_393_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22022..24658)
DNA (2637bp) protein (879aa)
TonB-dependent receptor plug domain protein n=2 Tax=Parabacteroides RepID=E1Z0D8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23703.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000G1_scaffold_393_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24773..27772
DNA (3000bp) protein (1000aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZUX5_9PORP
glycoside hydrolase family protein
L3_105_000G1_scaffold_393_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27820..28848
DNA (1029bp) protein (343aa)
L-threonine-O-3-phosphate decarboxylase, putative n=4 Tax=Bacteroidales RepID=A6LEE8_PARD8
Aminotransferase class I and II family protein {ECO:0000313|EMBL:KDS41979.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L-threonine-O-3-phosphate decarboxylase
L3_105_000G1_scaffold_393_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28912..29082)
DNA (171bp) protein (57aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=D0THP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK60730.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_000G1_scaffold_393_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29220..29897
DNA (678bp) protein (226aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
1-acyl-sn-glycerol-3-phosphate acetyltransferase n=2 Tax=Bacteroidales RepID=D7IRF4_9BACE
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_105_000G1_scaffold_393_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29907..31394)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0D3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23708.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000G1_scaffold_393_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31454..32455)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEE0_PARD8
lysophospholipase
Uncharacterized protein {ECO:0000313|EMBL:ABR44054.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000G1_scaffold_393_24
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32678..33439
DNA (762bp) protein (254aa)
Two-component system response regulator n=2 Tax=Parabacteroides RepID=A6LED9_PARD8
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CDB50283.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_000G1_scaffold_393_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33740..34879)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRF8_9BACE
Archaeal ATPase family protein {ECO:0000313|EMBL:KDS71889.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000G1_scaffold_393_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35108..35752
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50246.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000G1_scaffold_393_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35762..36355
DNA (594bp) protein (198aa)
RNA polymerase ECF-type sigma factor n=8 Tax=Bacteroidales RepID=A6LED6_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFK60722.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000G1_scaffold_393_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36391..37380
DNA (990bp) protein (330aa)
Anti-sigma factor n=4 Tax=Bacteroidales RepID=D7IRG1_9BACE
anti-sigma factor
FecR family protein {ECO:0000313|EMBL:KDS58392.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000G1_scaffold_393_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37594..40971
DNA (3378bp) protein (1126aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroidales RepID=K6BRI9_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN30758.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000G1_scaffold_393_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40976..42535
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZD93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24797.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
Displaying items 1-30 of 69 in total

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