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L3_105_000G1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_447_1
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..1091)
DNA (1089bp) protein (363aa)
Transposase n=2 Tax=Acidaminococcus RepID=G4Q682_ACIIR
transposase
Transposase {ECO:0000313|EMBL:AEQ22183.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_105_000G1_scaffold_447_2
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1357..1890
DNA (534bp) protein (178aa)
Hydrolase NUDIX family n=1 Tax=Veillonella sp. CAG:933 RepID=R5BUJ6_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCX56382.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
NUDIX hydrolase
L3_105_000G1_scaffold_447_3
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1933..3108
DNA (1176bp) protein (392aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Phosphopentomutase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLC8_9FIRM
phosphopentomutase
L3_105_000G1_scaffold_447_4
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3181..3483
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX56378.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L3_105_000G1_scaffold_447_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3728..3988)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=2 Tax=Veillonella RepID=K9D3P8_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S20
L3_105_000G1_scaffold_447_6
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4289..6931
DNA (2643bp) protein (881aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
DNA polymerase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BI40_9FIRM
DNA polymerase I
L3_105_000G1_scaffold_447_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7038..7862
DNA (825bp) protein (275aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020854}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
mutM; putative formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEV3_9FIRM
L3_105_000G1_scaffold_447_8
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7894..8508
DNA (615bp) protein (205aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Dephospho-CoA kinase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM88_9FIRM
dephospho-CoA kinase
L3_105_000G1_scaffold_447_9
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8505..9074
DNA (570bp) protein (190aa)
Transglycosylase SLT domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BR00_9FIRM
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CCX53886.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
lytic transglycosylase
L3_105_000G1_scaffold_447_10
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9104..9763
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53885.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_105_000G1_scaffold_447_11
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9954..10412
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Veillonella sp. CAG:933 RepID=R5BI33_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_105_000G1_scaffold_447_12
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10453..11541
DNA (1089bp) protein (363aa)
Transcription termination factor NusA n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEU8_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
NusA antitermination factor
L3_105_000G1_scaffold_447_13
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11541..11816
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53882.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_105_000G1_scaffold_447_14
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11821..12126
DNA (306bp) protein (102aa)
Ribosomal protein L7Ae n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQZ5_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCX53881.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L3_105_000G1_scaffold_447_15
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12144..14750
DNA (2607bp) protein (869aa)
Translation initiation factor IF-2 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE68_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
translation initiation factor IF-2
L3_105_000G1_scaffold_447_16
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14760..15128
DNA (369bp) protein (123aa)
Ribosome-binding factor A n=2 Tax=Veillonella RepID=K9DK68_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
ribosome-binding factor A
L3_105_000G1_scaffold_447_17
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15112..16050
DNA (939bp) protein (313aa)
DHHA1 domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEU2_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:CCX53878.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
phosphoesterase RecJ domain-containing protein
L3_105_000G1_scaffold_447_18
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16050..16925
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
tRNA pseudouridine synthase B n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0F6_9FIRM
tRNA pseudouridine synthase B
L3_105_000G1_scaffold_447_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16938..17870
DNA (933bp) protein (311aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE59_9FIRM
riboflavin biosynthesis protein RibF
L3_105_000G1_scaffold_447_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18100..19284
DNA (1185bp) protein (395aa)
Putative transcriptional regulator GntR family n=1 Tax=Veillonella sp. CAG:933 RepID=R5BI22_9FIRM
Putative transcriptional regulator GntR family {ECO:0000313|EMBL:CCX53874.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
GntR family transcriptional regulator
L3_105_000G1_scaffold_447_21
unknown

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19534..19695
DNA (162bp) protein (54aa)

This feature has no annotations

L3_105_000G1_scaffold_447_22
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19664..20431
DNA (768bp) protein (256aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Shikimate kinase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BET7_9FIRM
shikimate kinase
L3_105_000G1_scaffold_447_23
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20431..22575
DNA (2145bp) protein (715aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Helicase RecD/TraA family n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM69_9FIRM
RecD/TraA family helicase
L3_105_000G1_scaffold_447_24
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22662..23318
DNA (657bp) protein (219aa)
ComF family protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQY6_9FIRM
ComF family protein {ECO:0000313|EMBL:CCX53871.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
amidophosphoribosyltransferase-like protein
L3_105_000G1_scaffold_447_25
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23338..24030)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53870.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_105_000G1_scaffold_447_26
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24195..24797)
DNA (603bp) protein (201aa)
Metal dependent phosphohydrolase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BI15_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCX53869.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
metal dependent phosphohydrolase
L3_105_000G1_scaffold_447_27
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25459..26277
DNA (819bp) protein (273aa)
Bacterial extracellular solute-binding protein family 3 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BET0_9FIRM
Bacterial extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CCX53868.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
family 3 extracellular solute-binding protein
L3_105_000G1_scaffold_447_28
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26478..27239
DNA (762bp) protein (254aa)
Putative glutamine ABC transporter periplasmic glutamine-binding protein GlnH n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM63_9FIRM
Putative glutamine ABC transporter periplasmic glutamine-binding protein GlnH {ECO:0000313|EMBL:CCX53867.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
arginine ABC transporter
L3_105_000G1_scaffold_447_29
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27269..28459
DNA (1191bp) protein (397aa)
GntR-family transcriptional regulator n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQY0_9FIRM
GntR-family transcriptional regulator {ECO:0000313|EMBL:CCX53866.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
GntR family transcriptional regulator
L3_105_000G1_scaffold_447_30
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28592..29248
DNA (657bp) protein (219aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE47_9FIRM
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CCX53865.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
polar amino acid ABC transporter permease
Displaying items 1-30 of 59 in total

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