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L3_105_000G1_scaffold_449

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_449_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183..656
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VX96_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EFR36476.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Xylose isomerase-like TIM barrel.
L3_105_000G1_scaffold_449_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(787..1113)
DNA (327bp) protein (109aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84034.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_105_000G1_scaffold_449_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1154..1957)
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VX94_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:ENY84035.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_000G1_scaffold_449_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1938..2759)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VX93_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:ENY84036.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
cof family hydrolase
L3_105_000G1_scaffold_449_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2781..3314)
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54355.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_449_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3399..4553)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BDZ2_9FIRM
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EQJ54356.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
proton/sugar symporter
L3_105_000G1_scaffold_449_7
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4730..5290)
DNA (561bp) protein (187aa)
hxlB; 3-hexulose-6-phosphate isomerase (EC:5.3.1.27)
6-phospho 3-hexuloisomerase n=4 Tax=Firmicutes RepID=E4LXU2_9CLOT
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:EGX69705.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_105_000G1_scaffold_449_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5304..5930)
DNA (627bp) protein (209aa)
3-hexulose-6-phosphate synthase {ECO:0000313|EMBL:EQJ54358.1}; EC=4.1.2.43 {ECO:0000313|EMBL:EQJ54358.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
3-hexulose-6-phosphate synthase (EC:4.1.2.43)
3-hexulose-6-phosphate synthase n=4 Tax=Firmicutes RepID=G1VX89_9FIRM
L3_105_000G1_scaffold_449_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5935..6699)
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=6 Tax=Firmicutes RepID=E4LXU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84041.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Transcriptional regulators of sugar metabolism
L3_105_000G1_scaffold_449_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6910..7794
DNA (885bp) protein (295aa)
PHP domain protein {ECO:0000313|EMBL:EFR36446.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFR36446.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PHP domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LXU5_9CLOT
Predicted metal-dependent phosphoesterases (PHP family)
L3_105_000G1_scaffold_449_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8015..9373)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NF85_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54361.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_449_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9377..9784)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54362.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_449_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10105..10647
DNA (543bp) protein (181aa)
pgsA1; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-alcohol phosphatidyltransferase n=4 Tax=Firmicutes RepID=E4LXU8_9CLOT
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EFR36278.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_449_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10848..12188)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85545.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
CBS/transporter associated domain-containing protein
L3_105_000G1_scaffold_449_15
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12348..13415)
DNA (1068bp) protein (356aa)
glutamyl aminopeptidase (EC:3.4.11.7)
M42 glutamyl aminopeptidase n=3 Tax=Firmicutes RepID=E4LXV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX69697.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_105_000G1_scaffold_449_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13484..14098)
DNA (615bp) protein (205aa)
DJ-1/PfpI family protein n=1 Tax=Clostridium difficile P28 RepID=T4NF91_CLODI
DJ-1/PfpI family protein {ECO:0000313|EMBL:EQJ54366.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein
L3_105_000G1_scaffold_449_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14951..15613)
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Deoxyribose-phosphate aldolase n=7 Tax=Firmicutes RepID=E4LXV2_9CLOT
deoxyribose-phosphate aldolase
L3_105_000G1_scaffold_449_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15702..16718)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BDY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85535.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_000G1_scaffold_449_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16943..17629)
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LXV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36316.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_449_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17716..18114
DNA (399bp) protein (133aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84053.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_105_000G1_scaffold_449_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18487..20625)
DNA (2139bp) protein (713aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LXV7_9CLOT
Transglutaminase-like protein {ECO:0000313|EMBL:EFR36289.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_105_000G1_scaffold_449_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20622..21554)
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LXV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36395.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_449_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21551..22504)
DNA (954bp) protein (318aa)
ATPase of unknown function (EC:3.6.3.-)
ATPase family associated with various cellular activities (AAA) n=6 Tax=Firmicutes RepID=E4LXV9_9CLOT
AAA domain family protein {ECO:0000313|EMBL:EQJ54375.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_449_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22700..23317)
DNA (618bp) protein (206aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84057.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_449_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23450..23959
DNA (510bp) protein (170aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54377.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_449_26
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24269..25687)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VX70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30372.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_105_000G1_scaffold_449_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26391..27095)
DNA (705bp) protein (235aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ARU8_9FIRM
DNA-cytosine methyltransferase
L3_105_000G1_scaffold_449_28
unknown

Not on your lists

27194..27337
DNA (144bp) protein (48aa)

This feature has no annotations

L3_105_000G1_scaffold_449_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27653..28216)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=N9V5U6_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY85774.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_449_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28229..29068)
DNA (840bp) protein (280aa)
Replication-relaxation family protein n=1 Tax=Clostridium difficile P28 RepID=T4N9S4_CLODI
Replication-relaxation family protein {ECO:0000313|EMBL:EQJ52416.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Displaying items 1-30 of 62 in total

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