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L3_105_000G1_scaffold_471

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_471_1
unknown

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2..91
DNA (90bp) protein (30aa)

This feature has no annotations

L3_105_000G1_scaffold_471_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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234..884
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P4S5_9BIFI
polysaccharide lyase family protein 8
Uncharacterized protein {ECO:0000313|EMBL:CDC15704.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_105_000G1_scaffold_471_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1248..1688
DNA (441bp) protein (147aa)
Bacterial hemoglobin n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHN4_9CLOT
vhb; Bacterial hemoglobin
Bacterial hemoglobin {ECO:0000313|EMBL:CDM69899.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_105_000G1_scaffold_471_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1725..3719
DNA (1995bp) protein (665aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98394.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
PTS system subunit IIABC
L3_105_000G1_scaffold_471_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3741..5159
DNA (1419bp) protein (473aa)
Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:KJJ73399.1}; EC=3.2.1.86 {ECO:0000313|EMBL:KJJ73399.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJG7_9CLOT
glycosyl hydrolase family protein
L3_105_000G1_scaffold_471_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5076..5693)
DNA (618bp) protein (206aa)
Chromate transport protein n=2 Tax=Clostridium RepID=B6FPK6_9CLOT
Chromate transport protein {ECO:0000313|EMBL:EEA81965.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Chromate transport protein ChrA
L3_105_000G1_scaffold_471_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5693..6268)
DNA (576bp) protein (192aa)
Chromate transport protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK5_9CLOT
Chromate transport protein {ECO:0000313|EMBL:EEA81964.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Chromate transport protein ChrA
L3_105_000G1_scaffold_471_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6272..7198)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23782.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L3_105_000G1_scaffold_471_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7597..8934
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EKR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01153.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
carbohydrate ABC transporter substrate-binding protein
L3_105_000G1_scaffold_471_10
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9053..9952
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EWI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01151.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ABC transporter permease
L3_105_000G1_scaffold_471_11
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9966..10859
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XL92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05227.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
ABC transporter
L3_105_000G1_scaffold_471_12
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10872..11051
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EMI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01145.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_105_000G1_scaffold_471_13
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10996..13248
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05229.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_105_000G1_scaffold_471_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13340..15502
DNA (2163bp) protein (721aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=2 Tax=Clostridium RepID=B6FPK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23783.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase
L3_105_000G1_scaffold_471_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15573..16424)
DNA (852bp) protein (284aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FPJ0_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA82054.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L3_105_000G1_scaffold_471_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16603..17529
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82053.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
dTDP-glucose pyrophosphorylase
L3_105_000G1_scaffold_471_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17529..18644
DNA (1116bp) protein (372aa)
Phosphotransferase enzyme family n=2 Tax=Clostridium RepID=B6FPI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25016.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphotransferase enzyme family.
L3_105_000G1_scaffold_471_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18761..19777
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEA82051.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEA82051.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI7_9CLOT
L3_105_000G1_scaffold_471_19
unknown

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comp(19850..20251)
DNA (402bp) protein (134aa)

This feature has no annotations

L3_105_000G1_scaffold_471_20
unknown

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comp(20341..21285)
DNA (945bp) protein (315aa)

This feature has no annotations

L3_105_000G1_scaffold_471_21
unknown

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comp(21224..22006)
DNA (783bp) protein (261aa)

This feature has no annotations

L3_105_000G1_scaffold_471_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22190..22996)
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQV5_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEA81560.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_000G1_scaffold_471_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23024..24403)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Clostridium RepID=B6FQV6_9CLOT
L3_105_000G1_scaffold_471_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24419..25474)
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Clostridium RepID=B6FQV7_9CLOT
L3_105_000G1_scaffold_471_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25500..26954)
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQ15_9CLOT
L3_105_000G1_scaffold_471_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27109..27846)
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEW7_9CLOT
L3_105_000G1_scaffold_471_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28025..28438
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22886.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_000G1_scaffold_471_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28451..30010
DNA (1560bp) protein (520aa)
LysM domain protein n=2 Tax=Clostridium RepID=B6FQW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22885.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LysM domain.
L3_105_000G1_scaffold_471_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30086..30964
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Clostridium RepID=B6FQW3_9CLOT
L3_105_000G1_scaffold_471_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30969..31643
DNA (675bp) protein (225aa)
FCD domain protein n=2 Tax=Clostridium RepID=B6FQW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22883.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, GntR family
Displaying items 1-30 of 51 in total

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