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L3_105_000G1_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_480_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

209..1174
DNA (966bp) protein (322aa)
Putative glutamate--cysteine ligase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYQ2_CALAS
putative glutamate--cysteine ligase
Putative glutamate--cysteine ligase {ECO:0000313|EMBL:BAL98139.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
L3_105_000G1_scaffold_480_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2173..2538
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUP9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16278.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L3_105_000G1_scaffold_480_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2670..4370)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70103.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_105_000G1_scaffold_480_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4510..4683)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70104.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_105_000G1_scaffold_480_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5026..6036)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29284.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hydrolase
L3_105_000G1_scaffold_480_6
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6342..7727
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCI3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16266.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L3_105_000G1_scaffold_480_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7958..9670
DNA (1713bp) protein (571aa)
Glycosyl hydrolase family 25 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ5_9BIFI
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EEG70107.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04328.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
lytC; 1,4-beta-N-acetylmuramidase
L3_105_000G1_scaffold_480_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9752..10660)
DNA (909bp) protein (303aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ6_9BIFI
hypothetical protein
L3_105_000G1_scaffold_480_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10657..12078)
DNA (1422bp) protein (474aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ7_9BIFI
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EEG70110.1}; dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:BAR04326.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rmlCD; fused dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
L3_105_000G1_scaffold_480_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12158..13180)
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ8_9BIFI
rmlB2; dTDP-glucose 4,6-dehydratase
L3_105_000G1_scaffold_480_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13292..14125
DNA (834bp) protein (278aa)
Nucleoside-diphosphate-sugar epimerases-like n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3K4_BIFAA
nucleoside-diphosphate-sugar epimerase family protein
Nucleoside-diphosphate-sugar epimerases-like {ECO:0000313|EMBL:BAF40287.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_105_000G1_scaffold_480_12
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14286..15791
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR0_9BIFI
Glucosyl transferase GtrII {ECO:0000313|EMBL:KFI70593.1}; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
glucosyl transferase GtrII
L3_105_000G1_scaffold_480_13
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15845..16795
DNA (951bp) protein (317aa)
Glycosyl transferase family protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY17_BIFBP
glycosyl transferase family protein
Bactoprenol glucosyl transferase {ECO:0000313|EMBL:AIZ15210.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_105_000G1_scaffold_480_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16798..17643)
DNA (846bp) protein (282aa)
Acyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR2_9BIFI
Acyltransferase {ECO:0000313|EMBL:EEG70115.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04321.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_105_000G1_scaffold_480_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17880..19826)
DNA (1947bp) protein (649aa)
Rhamnan synthesis protein F n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR3_9BIFI
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAR04320.1}; Rhamnan synthesis protein F {ECO:0000313|EMBL:EEG70116.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_105_000G1_scaffold_480_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19985..21259)
DNA (1275bp) protein (425aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR4_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG70117.1}; Polysaccharide ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR04319.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ATP-binding protein ABC transporter system for polysaccharides
L3_105_000G1_scaffold_480_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21259..22086)
DNA (828bp) protein (276aa)
ABC-2 type transporter n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR5_9BIFI
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
tagG; tagg
L3_105_000G1_scaffold_480_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22191..23216)
DNA (1026bp) protein (342aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG70119.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG70119.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR6_9BIFI
glycosyltransferase family protein
L3_105_000G1_scaffold_480_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23267..25876)
DNA (2610bp) protein (870aa)
Arylsulfatase {ECO:0000313|EMBL:EEG70120.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEG70120.1};; Uncharacterized protein {ECO:0000313|EMBL:BAR04316.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Arylsulfatase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUR7_9BIFI
phosphoglycerol transferase
L3_105_000G1_scaffold_480_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26129..26356)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY48_BIFBP
ATPase {ECO:0000313|EMBL:KEF29265.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_105_000G1_scaffold_480_21
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26480..27067
DNA (588bp) protein (196aa)
Putative resolvase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPJ3_BIFLS
integrase
Integrase {ECO:0000313|EMBL:AIZ15202.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_105_000G1_scaffold_480_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27060..28364
DNA (1305bp) protein (435aa)
Transposase, IS605 OrfB family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CP80_BIFBR
transposase
Transposase {ECO:0000313|EMBL:AIZ15201.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_105_000G1_scaffold_480_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28707..29756
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PXB2_9BIFI
L3_105_000G1_scaffold_480_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30171..30644)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P122_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14399.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L3_105_000G1_scaffold_480_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30845..31903
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium RepID=C0BUS0_9BIFI
Transcriptional regulator {ECO:0000313|EMBL:BAR04313.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEG70123.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ribose operon repressor RbsR
L3_105_000G1_scaffold_480_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32174..33130
DNA (957bp) protein (319aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium RepID=C0BUS1_9BIFI
Nucleoside hydrolase {ECO:0000313|EMBL:KEF29259.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
putative nucleoside hydrolase protein
L3_105_000G1_scaffold_480_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33196..34647
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQA7_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29258.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
tetracycline resistance protein
L3_105_000G1_scaffold_480_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34768..35745
DNA (978bp) protein (326aa)
Putative ribokinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUS3_9BIFI
Putative ribokinase {ECO:0000313|EMBL:EEG70126.1}; Sugar kinase {ECO:0000313|EMBL:BAR04310.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sugar kinase
L3_105_000G1_scaffold_480_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35922..36935)
DNA (1014bp) protein (338aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Bifidobacterium RepID=C0BUS4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14405.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_105_000G1_scaffold_480_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


37200..37487
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=6 Tax=Bifidobacterium RepID=A1A3I1_BIFAA
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Displaying items 1-30 of 77 in total

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