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L3_105_000G1_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_486_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(75..1109)
DNA (1035bp) protein (345aa)
NADH oxidase {ECO:0000313|EMBL:KJJ68157.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJJ68157.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF58_9CLOT
NADH oxidase
L3_105_000G1_scaffold_486_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1231..1578
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5D0_9FIRM
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EEF68805.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
transcriptional regulator
L3_105_000G1_scaffold_486_3
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1804..3861)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ90991.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_105_000G1_scaffold_486_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3989..6202)
DNA (2214bp) protein (738aa)
AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7A6_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:CCZ61453.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AraC family transcriptional regulator
L3_105_000G1_scaffold_486_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6408..7394
DNA (987bp) protein (329aa)
ABC transporter permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TX71_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ61452.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport systems inner membrane component
L3_105_000G1_scaffold_486_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7408..8313
DNA (906bp) protein (302aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TR01_9CLOT
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CCZ61451.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000G1_scaffold_486_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8341..9969
DNA (1629bp) protein (543aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6C8_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCZ61450.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter substrate-binding protein
L3_105_000G1_scaffold_486_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10100..11224
DNA (1125bp) protein (375aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40949.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_105_000G1_scaffold_486_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11291..11710
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61100.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_105_000G1_scaffold_486_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11809..12483
DNA (675bp) protein (225aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW39_9CLOT
L3_105_000G1_scaffold_486_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12480..12959
DNA (480bp) protein (160aa)
ATPase n=1 Tax=Clostridium bolteae 90B8 RepID=R0BMT9_9CLOT
ATPase {ECO:0000313|EMBL:ENZ46063.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_105_000G1_scaffold_486_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13047..14696
DNA (1650bp) protein (550aa)
Uncharacterized protein n=6 Tax=Clostridium bolteae RepID=A8RXU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14408.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
peptidoglycan-binding lysin domain-containing protein
L3_105_000G1_scaffold_486_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14848..15576
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=9 Tax=Clostridium RepID=G5HYK9_9CLOT
L3_105_000G1_scaffold_486_14
unknown

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15573..15689
DNA (117bp) protein (39aa)

This feature has no annotations

L3_105_000G1_scaffold_486_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15653..16660
DNA (1008bp) protein (336aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTZ2_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG57466.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase
L3_105_000G1_scaffold_486_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16731..16949
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61109.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_105_000G1_scaffold_486_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16967..19030
DNA (2064bp) protein (688aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BM27_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI72873.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_105_000G1_scaffold_486_18
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19221..19508
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KL02_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
SSU ribosomal protein S6P
L3_105_000G1_scaffold_486_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19556..20032
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW7_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
single-strand binding protein
L3_105_000G1_scaffold_486_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20075..20344
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW13_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
30S ribosomal protein S18
L3_105_000G1_scaffold_486_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20553..21182
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CAU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13365.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_105_000G1_scaffold_486_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21416..22915
DNA (1500bp) protein (500aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5S9_9CLOT
Tagaturonate reductase {ECO:0000313|EMBL:CCY44262.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_105_000G1_scaffold_486_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23201..24361
DNA (1161bp) protein (387aa)
diguanylate kinase signaling protein (EC:2.7.7.65)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45445.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_105_000G1_scaffold_486_24
unknown

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24358..24531
DNA (174bp) protein (58aa)

This feature has no annotations

L3_105_000G1_scaffold_486_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24699..25160
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41443.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_000G1_scaffold_486_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25313..25873
DNA (561bp) protein (187aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Clostridium bolteae RepID=A8RPJ4_9CLOT
L3_105_000G1_scaffold_486_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25875..26690
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96869.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
N-acetyltransferase GCN5
L3_105_000G1_scaffold_486_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26593..27354)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A2K7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46196.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_105_000G1_scaffold_486_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27458..28192
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RPI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17410.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_105_000G1_scaffold_486_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28192..29337
DNA (1146bp) protein (382aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQV2_9CLOT
Displaying items 1-30 of 50 in total

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