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L3_105_000G1_scaffold_499

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_499_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..654)
DNA (654bp) protein (218aa)
Electron transport complex, RnfABCDGE type, C subunit (Fragment) n=1 Tax=Escherichia coli 99.1753 RepID=L9BJB8_ECOLX
rnfC; Electron transport complex protein RnfC
Electron transport complex subunit RsxC {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
L3_105_000G1_scaffold_499_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(647..1225)
DNA (579bp) protein (193aa)
Electron transport complex protein RnfB n=759 Tax=Enterobacteriaceae RepID=RNFB_ECO24
rnfB; electron transport complex protein RnfB
Electron transport complex subunit RsxB {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_105_000G1_scaffold_499_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1225..1806)
DNA (582bp) protein (194aa)
Electron transport complex protein RnfA n=1179 Tax=Enterobacteriaceae RepID=RNFA_ECO24
rsxA; electron transport complex protein RsxA
Electron transport complex subunit RsxA {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_105_000G1_scaffold_499_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1883..2323)
DNA (441bp) protein (147aa)
Uncharacterized protein n=804 Tax=Enterobacteriaceae RepID=J7QRH2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH11417.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_105_000G1_scaffold_499_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2409..2624)
DNA (216bp) protein (72aa)
OriC-binding nucleoid-associated protein n=1359 Tax=Enterobacteriaceae RepID=CNU_ECO57
hypothetical protein
Modulating protein ymoA {ECO:0000313|EMBL:EZK22992.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L3_105_000G1_scaffold_499_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3265..4305
DNA (1041bp) protein (347aa)
Oxidoreductase, NAD-binding n=632 Tax=Enterobacteriaceae RepID=A7ZM84_ECO24
ydgJ; putative oxidoreductase,Uncharacterized oxidoreductase ydgJ,putative oxidoreductase,Uncharacterized protein conserved in bacteria,Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFJ99886.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
L3_105_000G1_scaffold_499_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4340..5341)
DNA (1002bp) protein (334aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00540, ECO:0000256|SAAS:SAAS00001832}; EC=3.5.4.4 {ECO:0000256|HAMAP-Rule:MF_00540, ECO:0000256|SAAS:SAAS00001830};; Adenosine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00540}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Adenosine deaminase n=474 Tax=Enterobacteriaceae RepID=ADD_ECO24
L3_105_000G1_scaffold_499_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5445..6617)
DNA (1173bp) protein (391aa)
MalY protein n=171 Tax=Escherichia coli RepID=A7ZM82_ECO24
malY; bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon
Protein MalY {ECO:0000313|EMBL:ESP08965.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_105_000G1_scaffold_499_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6627..8219)
DNA (1593bp) protein (531aa)
Bifunctional maltose and glucose-specific PTS system components IICB n=216 Tax=Enterobacteriaceae RepID=H9US31_ECOLX
PTS system maltose and glucose-specific transporter subunits IICB
PTS system, maltose and glucose-specific subfamily, IIC component domain protein {ECO:0000313|EMBL:KEO11229.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
L3_105_000G1_scaffold_499_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8394..9422
DNA (1029bp) protein (343aa)
Repressor of malX and Y genes n=538 Tax=Enterobacteriaceae RepID=C3T902_ECOLX
DNA-binding transcriptional repressor MalI
DNA-binding transcriptional repressor MalI {ECO:0000313|EMBL:EFE62253.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_105_000G1_scaffold_499_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9534..10301
DNA (768bp) protein (256aa)
7-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KDV65425.1}; EC=1.1.1.159 {ECO:0000313|EMBL:KDV65425.1};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
7-alpha-hydroxysteroid dehydrogenase n=402 Tax=Escherichia coli RepID=E2QMI2_ECOLX
hdhA; 7-alpha-hydroxysteroid dehydrogenase
L3_105_000G1_scaffold_499_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10542..11120
DNA (579bp) protein (193aa)
Transcriptional regulator UidR n=257 Tax=Enterobacteriaceae RepID=A7ZM78_ECO24
uidR; DNA-binding transcriptional repressor
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFK47084.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L3_105_000G1_scaffold_499_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11509..13320
DNA (1812bp) protein (604aa)
Beta-glucuronidase {ECO:0000313|EMBL:EHV59656.1}; EC=3.2.1.31 {ECO:0000313|EMBL:EHV59656.1};; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
Beta-glucuronidase n=244 Tax=cellular organisms RepID=BGLR_ECOLI
beta-glucuronidase
L3_105_000G1_scaffold_499_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13317..14690
DNA (1374bp) protein (458aa)
Glucuronide permease uidB n=172 Tax=Enterobacteriaceae RepID=A7ZM76_ECO24
uidB; glucuronide transporter
Glucuronide carrier protein {ECO:0000313|EMBL:EGU97455.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_105_000G1_scaffold_499_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14729..15994
DNA (1266bp) protein (422aa)
GuidC n=2 Tax=Escherichia coli RepID=E9VZT3_ECOLX
uidC; outer membrane porin protein
Outer membrane porin, OprD family {ECO:0000313|EMBL:ESA81477.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
L3_105_000G1_scaffold_499_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16039..17547)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=202 Tax=Enterobacteriaceae RepID=A7ZM74_ECO24
hypothetical protein
YdgA protein {ECO:0000313|EMBL:CAU97633.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_105_000G1_scaffold_499_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17648..18823)
DNA (1176bp) protein (392aa)
Mannose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000611}; EC=5.3.1.8 {ECO:0000256|RuleBase:RU000611};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Mannose-6-phosphate isomerase n=164 Tax=Enterobacteriaceae RepID=B7L5G5_ECO55
mannose-6-phosphate isomerase
L3_105_000G1_scaffold_499_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19022..20668
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:ENH08900.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ENH08900.1};; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
Fumarate hydratase class I, aerobic n=725 Tax=Enterobacteriaceae RepID=FUMA_ECOL6
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit beta
L3_105_000G1_scaffold_499_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20810..22213
DNA (1404bp) protein (468aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
Fumarate hydratase class II n=29 Tax=Escherichia coli RepID=B6IB45_ECOSE
fumC; fumarate hydratase
L3_105_000G1_scaffold_499_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22210..23139)
DNA (930bp) protein (310aa)
DNA replication terminus site-binding protein n=147 Tax=Enterobacteriaceae RepID=TUS_ECO24
tus; DNA replication terminus site-binding protein
DNA replication terminus site-binding protein {ECO:0000313|EMBL:AFH11401.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_105_000G1_scaffold_499_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23215..24516)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
Sensor histidine protein kinase (RstA regulator) n=182 Tax=Enterobacteriaceae RepID=J7R172_ECOLX
sensor protein RstB
L3_105_000G1_scaffold_499_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24520..25239)
DNA (720bp) protein (240aa)
Two component transcriptional regulator, winged helix family n=187 Tax=Enterobacteriaceae RepID=E8Y7N6_ECOKO
rstA; DNA-binding response regulator RstA
Transcriptional regulator {ECO:0000313|EMBL:KHJ18739.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_000G1_scaffold_499_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25368..25703
DNA (336bp) protein (112aa)
Inner membrane protein YdgC n=859 Tax=Enterobacteriaceae RepID=YDGC_ECO57
ydgC; inner membrane protein ydgC
Inner membrane protein ydgC {ECO:0000313|EMBL:EIF86231.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L3_105_000G1_scaffold_499_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25700..26422)
DNA (723bp) protein (241aa)
Dihydrofolate reductase FolM {ECO:0000313|EMBL:EIH23765.1}; EC=1.5.1.3 {ECO:0000313|EMBL:EIH23765.1};; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
Dihydrofolate reductase isozyme n=265 Tax=Enterobacteriaceae RepID=B7L5F8_ECO55
folM; dihydrofolate reductase isozyme
L3_105_000G1_scaffold_499_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26459..27841)
DNA (1383bp) protein (461aa)
Putative arginine/ornithine antiporter n=804 Tax=Bacteria RepID=ARCD_ECOL6
arginine/ornithine antiporter
Putative arginine/ornithine antiporter {ECO:0000313|EMBL:EMX39917.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_105_000G1_scaffold_499_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28027..28971)
DNA (945bp) protein (315aa)
Protein ydgH n=968 Tax=Enterobacteriaceae RepID=C3T982_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG56591.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L3_105_000G1_scaffold_499_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29495..31027
DNA (1533bp) protein (511aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NAD(P) transhydrogenase subunit alpha n=334 Tax=Enterobacteriaceae RepID=E8Y8B2_ECOKO
L3_105_000G1_scaffold_499_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31038..32426
DNA (1389bp) protein (463aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
NAD(P) transhydrogenase subunit beta n=1212 Tax=Bacteria RepID=PNTB_ECO57
hypothetical protein
L3_105_000G1_scaffold_499_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32451..33485)
DNA (1035bp) protein (345aa)
TqsA transporter n=12 Tax=Escherichia coli RepID=E9VZR8_ECOLX
tqsA; transporter
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:KHJ18732.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_000G1_scaffold_499_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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33897..34262
DNA (366bp) protein (122aa)
Spermidine export protein MdtJ n=1151 Tax=Enterobacteriaceae RepID=MDTJ_ECO24
small multidrug resistance protein
Spermidine export protein MdtJ {ECO:0000256|HAMAP-Rule:MF_01598, ECO:0000256|SAAS:SAAS00166061}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
Displaying items 1-30 of 50 in total

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