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L3_105_000G1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_512_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54..386)
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KJ39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25689.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_512_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(453..2084)
DNA (1632bp) protein (544aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JF10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88740.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC transporter-like protein
L3_105_000G1_scaffold_512_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2108..3844)
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A5KJ37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25688.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter
L3_105_000G1_scaffold_512_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4102..4740)
DNA (639bp) protein (213aa)
Chloramphenicol acetyltransferase n=5 Tax=Clostridiales RepID=E5XK44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25687.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
chloramphenicol acetyltransferase
L3_105_000G1_scaffold_512_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4794..5648)
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=A5KJ34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25686.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator, AraC family
L3_105_000G1_scaffold_512_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5849..6055
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=A5KJ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25685.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Transcriptional regulator, Cro/CI family
L3_105_000G1_scaffold_512_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6052..6483
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QH93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88745.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_105_000G1_scaffold_512_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6501..6860
DNA (360bp) protein (120aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KJ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25683.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000G1_scaffold_512_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7008..7304
DNA (297bp) protein (99aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KJ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25682.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000G1_scaffold_512_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7425..7643)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=A5KJ29_9FIRM
XRE family Transcriptional regulator {ECO:0000313|EMBL:EFV18311.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000G1_scaffold_512_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7713..7889)
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QAF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25680.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulatory protein
L3_105_000G1_scaffold_512_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7961..8572)
DNA (612bp) protein (204aa)
Methyltransferase domain protein n=3 Tax=Clostridiales RepID=A5KJ27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25679.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_105_000G1_scaffold_512_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8834..9319
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KJ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88751.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
transposase IS4 family protein
L3_105_000G1_scaffold_512_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9324..9608)
DNA (285bp) protein (95aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KJ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25327.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Bacterial protein of unknown function (DUF961).
L3_105_000G1_scaffold_512_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9783..10124)
DNA (342bp) protein (114aa)
Conserved domain protein n=5 Tax=Clostridiales RepID=A5KJ23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26903.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative cell surface protein
L3_105_000G1_scaffold_512_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10427..13051)
DNA (2625bp) protein (875aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=5 Tax=Clostridiales RepID=A5KJ22_9FIRM
Pyruvate {ECO:0000313|EMBL:EFV18317.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000G1_scaffold_512_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13134..14399)
DNA (1266bp) protein (422aa)
noxA; nitrate reductase, NADH oxidase subunit NoxA (EC:1.7.1.4)
Pyridine nucleotide-disulfide oxidoreductase n=5 Tax=Clostridiales RepID=A5KJ20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26901.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000G1_scaffold_512_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14403..14849)
DNA (447bp) protein (149aa)
4Fe-4S binding domain protein n=5 Tax=Clostridiales RepID=A5KJ19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26900.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
anaerobic dimethylsulfoxide reductase subunit B
L3_105_000G1_scaffold_512_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14862..16766)
DNA (1905bp) protein (635aa)
cooS_2; carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=5 Tax=Clostridiales RepID=A5KJ18_9FIRM
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:CCZ26899.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000G1_scaffold_512_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16915..17310)
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QE81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26898.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Rrf2 family protein
L3_105_000G1_scaffold_512_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17501..18898)
DNA (1398bp) protein (466aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=3 Tax=Clostridiales RepID=A5KJ16_9FIRM
L3_105_000G1_scaffold_512_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19285..20304)
DNA (1020bp) protein (340aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=5 Tax=Clostridiales RepID=A5KJ15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26896.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Small-conductance mechanosensitive channel
L3_105_000G1_scaffold_512_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20397..21266)
DNA (870bp) protein (290aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KJ13_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
conserved hypothetical protein TIGR00726
L3_105_000G1_scaffold_512_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..21612)
DNA (363bp) protein (121aa)
UPF0102 protein RUMTOR_00208 n=5 Tax=Clostridiales RepID=A5KJ12_9FIRM
UPF0102 protein BN734_00770 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
conserved hypothetical protein TIGR00252
L3_105_000G1_scaffold_512_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21670..22437)
DNA (768bp) protein (256aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=4 Tax=Lachnospiraceae RepID=A5KJ11_9FIRM
L3_105_000G1_scaffold_512_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22430..22966)
DNA (537bp) protein (179aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=5 Tax=Clostridiales RepID=A5KJ10_9FIRM
L3_105_000G1_scaffold_512_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23115..23957)
DNA (843bp) protein (281aa)
Ribosome biogenesis GTPase A n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QX58_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ribosome biogenesis GTP-binding protein YlqF
L3_105_000G1_scaffold_512_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23975..24649)
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QDW4_9FIRM
L3_105_000G1_scaffold_512_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24829..25176)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=5 Tax=Clostridiales RepID=A5KJ05_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ribosomal protein L19, bacterial type
L3_105_000G1_scaffold_512_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25292..26659)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KJ04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26888.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Displaying items 1-30 of 55 in total

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