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L3_105_000G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_550_1
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(319..1053)
DNA (735bp) protein (245aa)
MltA-interacting protein MipA n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JRA0_FUSVA
MltA-interacting protein MipA {ECO:0000313|EMBL:EES63443.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
MltA-interacting MipA family protein
L3_105_000G1_scaffold_550_2
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1074..2876)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=U6Q194_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EJZ44692.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
polysaccharide deacetylase
L3_105_000G1_scaffold_550_3
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(2890..4005)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PSU4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO81823.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
peptidase M29 aminopeptidase II
L3_105_000G1_scaffold_550_4
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

4322..5536
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-6 RepID=U7TNN2_FUSNU
Uncharacterized protein {ECO:0000313|EMBL:ERT45879.1}; TaxID=1316587 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum CTI-6.;"
ATPase
L3_105_000G1_scaffold_550_5
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(5616..6485)
DNA (870bp) protein (290aa)
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:EES63150.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EES63150.1};; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
D-ribose-binding periplasmic protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQT7_FUSVA
ribose-binding protein
L3_105_000G1_scaffold_550_6
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6501..7427)
DNA (927bp) protein (309aa)
Ribose ABC transporter permease protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQT8_FUSVA
Ribose ABC transporter permease protein {ECO:0000313|EMBL:EES63151.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
ribose ABC transporter membrane protein
L3_105_000G1_scaffold_550_7
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7420..8916)
DNA (1497bp) protein (499aa)
Ribose transport ATP-binding protein rbsa {ECO:0000313|EMBL:EES63152.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EES63152.1};; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Ribose transport ATP-binding protein rbsa n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQT9_FUSVA
ribose ABC transporter ATP-binding protein
L3_105_000G1_scaffold_550_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8926..9333)
DNA (408bp) protein (136aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HRP7_9FUSO
rbsD; D-ribose pyranase
L3_105_000G1_scaffold_550_9
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9333..10256)
DNA (924bp) protein (308aa)
Ribokinase {ECO:0000313|EMBL:EES63154.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EES63154.1};; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Ribokinase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQU1_FUSVA
ribokinase
L3_105_000G1_scaffold_550_10
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(10249..11208)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PNP2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO85111.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
LacI family transcriptional regulator
L3_105_000G1_scaffold_550_11
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

11541..12353
DNA (813bp) protein (271aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQU3_FUSVA
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EES63156.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_000G1_scaffold_550_12
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12366..12641
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HE95_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26377.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
L3_105_000G1_scaffold_550_13
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12721..13116
DNA (396bp) protein (132aa)
META domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQU5_FUSVA
META domain protein {ECO:0000313|EMBL:EES63158.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_000G1_scaffold_550_14
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13249..14565
DNA (1317bp) protein (439aa)
MATE efflux family protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HIY6_9FUSO
MATE efflux family protein {ECO:0000313|EMBL:EFS26379.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
Na+ driven multidrug efflux pump, MATE efflux family
L3_105_000G1_scaffold_550_15
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(14812..16329)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HAJ4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26348.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
extracellular solute-binding protein
L3_105_000G1_scaffold_550_16
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(16612..18009)
DNA (1398bp) protein (466aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JRC3_FUSVA
L3_105_000G1_scaffold_550_17
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(18011..18724)
DNA (714bp) protein (238aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JRC4_FUSVA
phosphoribosylaminoimidazole-succinocarboxamide synthase
L3_105_000G1_scaffold_550_18
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(19143..20315)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PSP1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26584.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
amidohydrolase
L3_105_000G1_scaffold_550_19
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

20458..21015
DNA (558bp) protein (186aa)
Site-specific recombinase, phage integrase family n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JR36_FUSVA
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EES63379.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
integrase family protein
L3_105_000G1_scaffold_550_20
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21166..21444
DNA (279bp) protein (93aa)
DNA-binding protein HU n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JR35_FUSVA
DNA-binding protein HU {ECO:0000313|EMBL:EES63378.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
histone family protein DNA-binding protein
L3_105_000G1_scaffold_550_21
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21929..23527
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PSN8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO81848.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
NAD(FAD)-utilizing dehydrogenase
L3_105_000G1_scaffold_550_22
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

23642..24361
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JR32_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES63375.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_000G1_scaffold_550_23
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

24374..25318
DNA (945bp) protein (315aa)
Autotransporter beta-domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JR31_FUSVA
Autotransporter beta-domain protein {ECO:0000313|EMBL:EES63374.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_000G1_scaffold_550_24
unknown

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26138..26440
DNA (303bp) protein (101aa)

This feature has no annotations

L3_105_000G1_scaffold_550_25

Not on your lists

26440..27384
DNA (945bp) protein (315aa)
Replication-associated protein ORF4 n=2 Tax=Chlamydia phage 1 RepID=REP_BPCHP
Uncultured bacterium extrachromosomal DNA RGF00016 {ECO:0000313|EMBL:CDL66976.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_105_000G1_scaffold_550_26
unknown

Not on your lists

27506..27640
DNA (135bp) protein (45aa)

This feature has no annotations

L3_105_000G1_scaffold_550_27
Eel River basin pequenovirus, Pequenovirus, Viruses

Not on your lists

27637..28482
DNA (846bp) protein (282aa)
Structural protein VP2 n=1 Tax=Microviridae phi-CA82 RepID=F8RW83_9VIRU
Isolate c20568, complete genome {ECO:0000313|EMBL:AJK28235.1}; TaxID=1609634 species="Viruses; ssDNA viruses; Microviridae; unclassified Microviridae.;" source="Eel River basin pequenovirus.;"
L3_105_000G1_scaffold_550_28
unknown

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28482..28646
DNA (165bp) protein (55aa)

This feature has no annotations

L3_105_000G1_scaffold_550_29
unknown

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28643..28741
DNA (99bp) protein (33aa)

This feature has no annotations

L3_105_000G1_scaffold_550_30
Chlamydia phage 3, Chlamydiamicrovirus, Viruses

Not on your lists

28741..30342
DNA (1602bp) protein (534aa)
Structural protein n=1 Tax=Chlamydia phage 3 RepID=Q6KF06_9VIRU
Structural protein {ECO:0000313|EMBL:CAD79477.1}; TaxID=225067 species="Viruses; ssDNA viruses; Microviridae; Gokushovirinae; Chlamydiamicrovirus; unclassified Chlamydiamicrovirus.;" source="Chlamydia phage 3.;"
Displaying items 1-30 of 50 in total

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