ggKbase home page

L3_105_000G1_scaffold_816

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_816_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..211
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE102 RepID=S1GWQ3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV79028.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
hypothetical protein
L3_105_000G1_scaffold_816_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..1493)
DNA (1281bp) protein (427aa)
Site-specific recombinase, phage integrase family n=19 Tax=Escherichia coli RepID=B3HAG3_ECOLX
putative defective integrase, Qin prophage
Phage integrase family protein {ECO:0000313|EMBL:ENB28351.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L3_105_000G1_scaffold_816_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1528..1764)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli H494 RepID=H1FAR3_ECOLX
Excisionase
Uncharacterized protein {ECO:0000313|EMBL:EOV79026.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_105_000G1_scaffold_816_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1852..4323)
DNA (2472bp) protein (824aa)
Exonuclease family protein {ECO:0000313|EMBL:KGM61283.1}; EC=3.1.11.- {ECO:0000313|EMBL:KGM61283.1};; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
Exonuclease VIII n=4 Tax=Escherichia coli RepID=S1HXF5_ECOLX
putative phage exodeoxyribonuclease
L3_105_000G1_scaffold_816_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4416..4607)
DNA (192bp) protein (64aa)
Uncharacterized protein YdfD n=117 Tax=Escherichia coli RepID=YDFD_ECOLI
ydfD; Qin prophage; hypothetical protein
Phage protein {ECO:0000313|EMBL:EQX85215.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L3_105_000G1_scaffold_816_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..4792)
DNA (189bp) protein (63aa)
Qin prophage cell division inhibition domain protein n=2 Tax=Escherichia coli RepID=H5QEA2_ECOLX
dicB; putative regulator of cell division encoded by prophage
DicB protein {ECO:0000313|EMBL:ESA85211.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_105_000G1_scaffold_816_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5360..5578)
DNA (219bp) protein (73aa)
Uncharacterized protein YdfC n=116 Tax=Enterobacteriaceae RepID=YDFC_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV67473.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L3_105_000G1_scaffold_816_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5608..5778)
DNA (171bp) protein (57aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=E9TDM0_ECOLX
ydfB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK19514.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_105_000G1_scaffold_816_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5738..5893)
DNA (156bp) protein (52aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=K3LK89_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EKI52679.1}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
ydfA; hypothetical protein
L3_105_000G1_scaffold_816_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6060..6467)
DNA (408bp) protein (136aa)
HTH-type transcriptional regulator DicA n=70 Tax=Escherichia coli RepID=DICA_ECOLI
XRE family transcriptional regulator
Phage repressor protein {ECO:0000313|EMBL:EOU95285.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L3_105_000G1_scaffold_816_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6551..6781
DNA (231bp) protein (77aa)
Repressor protein of division inhibition gene dicB n=95 Tax=Escherichia coli RepID=DICC_ECOLI
dicC; DNA-binding transcriptional regulator DicC
Division inhibition gene repressor protein DicB {ECO:0000313|EMBL:AEE56615.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_105_000G1_scaffold_816_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6765..7286
DNA (522bp) protein (174aa)
Uncharacterized protein n=50 Tax=Escherichia coli RepID=B7LZV9_ECO8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK19510.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_105_000G1_scaffold_816_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7267..8232
DNA (966bp) protein (322aa)
Uncharacterized protein n=54 Tax=Escherichia coli RepID=B7LZV8_ECO8A
hypothetical protein
Putative replication protein {ECO:0000313|EMBL:KEO24984.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_105_000G1_scaffold_816_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..8695
DNA (423bp) protein (141aa)
Uncharacterized protein n=87 Tax=Escherichia coli RepID=B7LZV7_ECO8A
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV98623.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_105_000G1_scaffold_816_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8692..9048
DNA (357bp) protein (119aa)
Uncharacterized protein n=109 Tax=Escherichia coli RepID=B7NUS0_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK36571.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_105_000G1_scaffold_816_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10201..10380
DNA (180bp) protein (60aa)
Uncharacterized protein n=103 Tax=Escherichia coli RepID=B2N032_ECOLX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KDY42401.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L3_105_000G1_scaffold_816_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10355..10537)
DNA (183bp) protein (61aa)
Uncharacterized protein n=66 Tax=Escherichia coli RepID=B7NUS2_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV78823.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_000G1_scaffold_816_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10715..12028
DNA (1314bp) protein (438aa)
Integrase catalytic region n=79 Tax=Escherichia coli RepID=E0IWZ8_ECOLW
integrase catalytic subunit
Uncharacterized protein {ECO:0000313|EMBL:ESK36568.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_105_000G1_scaffold_816_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12465..12797)
DNA (333bp) protein (111aa)
Protein FlxA n=144 Tax=Escherichia coli RepID=FLXA_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOU91511.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_105_000G1_scaffold_816_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13330..13569
DNA (240bp) protein (80aa)
Antitoxin RelB n=253 Tax=Enterobacteriaceae RepID=RELB_ECOLI
hypothetical protein
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein {ECO:0000313|EMBL:EGI11170.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_105_000G1_scaffold_816_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13569..13856
DNA (288bp) protein (96aa)
mRNA interferase RelE n=136 Tax=Enterobacteriaceae RepID=RELE_ECOLI
RelE toxin
Toxin RelE {ECO:0000313|EMBL:ESA93857.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L3_105_000G1_scaffold_816_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13928..14083
DNA (156bp) protein (52aa)
Conserved domain protein n=1 Tax=Escherichia coli TA280 RepID=F4V2C0_ECOLX
protein hokC
Hok/gef family protein {ECO:0000313|EMBL:EFJ76000.1}; Flags: Fragment;; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_105_000G1_scaffold_816_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14300..14551
DNA (252bp) protein (84aa)
Uncharacterized protein Rem n=182 Tax=Escherichia coli RepID=REM_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY75383.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_105_000G1_scaffold_816_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14898..15947
DNA (1050bp) protein (350aa)
Uncharacterized protein n=111 Tax=Escherichia coli RepID=B7LZU5_ECO8A
putative prophage protein
Uncharacterized protein {ECO:0000313|EMBL:KDY55820.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L3_105_000G1_scaffold_816_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15961..16713
DNA (753bp) protein (251aa)
Antitermination protein Q homolog from lambdoid prophage Qin n=157 Tax=Escherichia coli RepID=REQ2_ECOLI
quuQ; Qin prophage; antitermination protein Q
Phage antitermination protein {ECO:0000313|EMBL:EOV62952.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_105_000G1_scaffold_816_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17135..17335)
DNA (201bp) protein (67aa)
Cold shock-like protein CspF n=323 Tax=Escherichia RepID=CSPF_ECOL6
putative cold shock protein
RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:EMX19399.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L3_105_000G1_scaffold_816_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17648..17863
DNA (216bp) protein (72aa)
Cold shock-like protein CspB n=304 Tax=Escherichia coli RepID=CSPB_ECOLI
Qin prophage; cold shock protein
Cold shock-like protein CspB {ECO:0000313|EMBL:ERA02400.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_105_000G1_scaffold_816_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18626..18832
DNA (207bp) protein (69aa)
Lysis protein S homolog from lambdoid prophage Qin n=353 Tax=Escherichia RepID=ESSQ_ECOLI
Lysis S family protein
Putative S lysis protein Qin prophage {ECO:0000313|EMBL:CEK04980.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L3_105_000G1_scaffold_816_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19148
DNA (312bp) protein (104aa)
Uncharacterized protein YdfR n=132 Tax=Escherichia RepID=YDFR_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV78810.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_000G1_scaffold_816_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19145..19678
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
Probable lysozyme from lambdoid prophage Qin n=299 Tax=Escherichia RepID=LYSQ_ECOLI
ydfQ; putative lysozyme from lambdoid prophage Qin
Displaying items 1-30 of 54 in total

View Taxonomy