ggKbase home page

L3_105_000G1_scaffold_6795

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_6795_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=3 Tax=Erysipelotrichaceae RepID=B0N5S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31860.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_105_000G1_scaffold_6795_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

580..738
DNA (159bp) protein (53aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5R9_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS18437.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator, TetR family
L3_105_000G1_scaffold_6795_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1958..2179)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N5R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34993.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_105_000G1_scaffold_6795_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2225..3265)
DNA (1041bp) protein (347aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Erysipelotrichaceae RepID=B0N5R7_9FIRM
ribosomal RNA small subunit methyltransferase H
L3_105_000G1_scaffold_6795_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3661..3933)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RR95_9FIRM
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:CCZ34917.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted pyrophosphatase
Displaying 5 items

View Taxonomy