ggKbase home page

L3_105_000G1_scaffold_2326

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_2326_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(192..1007)
DNA (816bp) protein (272aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF5_9ACTN
L3_105_000G1_scaffold_2326_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1359..2564)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43523.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_2326_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2794..3879)
DNA (1086bp) protein (362aa)
Putative isocitrate dehydrogenase, NAD-dependent n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF8_9ACTN
Putative isocitrate dehydrogenase, NAD-dependent {ECO:0000313|EMBL:EEP43524.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
isocitrate dehydrogenase
L3_105_000G1_scaffold_2326_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3883..4578)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43525.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_2326_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4761..5201)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43526.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_2326_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5208..6308)
DNA (1101bp) protein (367aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG1_9ACTN
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein {ECO:0000313|EMBL:EEP43527.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_2326_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6398..7354)
DNA (957bp) protein (319aa)
EDD domain protein, DegV family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG2_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EEP43528.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
degV family protein
L3_105_000G1_scaffold_2326_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7429..8013)
DNA (585bp) protein (195aa)
Ribosomal subunit interface protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG3_9ACTN
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEP43529.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
30S ribosomal protein S30P; sigma 54 modulation protein
L3_105_000G1_scaffold_2326_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8179..9138)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43530.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
family 3 extracellular solute-binding protein
L3_105_000G1_scaffold_2326_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9629..10240)
DNA (612bp) protein (204aa)
ComF family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8F9_9ACTN
ComF family protein {ECO:0000313|EMBL:EEA91423.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_105_000G1_scaffold_2326_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10466..12079)
DNA (1614bp) protein (538aa)
PSP1 C-terminal domain protein (Fragment) n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK7_9ACTN
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEP43759.1}; Flags: Fragment;; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
PSP1 domain-containing protein
L3_105_000G1_scaffold_2326_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12070..13215)
DNA (1146bp) protein (382aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Putative DNA polymerase III, delta' subunit n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK8_9ACTN
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEP43760.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_2326_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13218..13898)
DNA (681bp) protein (227aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK9_9ACTN
Displaying 13 items

View Taxonomy