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L3_105_000G1_scaffold_1094

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_1094_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..927
DNA (927bp) protein (309aa)
L-threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAB3_9ACTN
Beta-eliminating lyase {ECO:0000313|EMBL:EEP44282.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_1094_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1002..2237)
DNA (1236bp) protein (412aa)
Putative membrane protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAB6_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EEP44193.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_1094_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2392..2982)
DNA (591bp) protein (197aa)
Acetyltransferase, GNAT family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAB7_9ACTN
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP44194.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
sortase-like acyltransferase
L3_105_000G1_scaffold_1094_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3136..3984)
DNA (849bp) protein (283aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAB8_9ACTN
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EEP44195.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_1094_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4294..5103
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC0_9ACTN
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEP44197.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
DeoR family transcriptional regulator
L3_105_000G1_scaffold_1094_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5207..6142)
DNA (936bp) protein (312aa)
tagatose-6-phosphate kinase (EC:2.7.1.144)
Putative tagatose-6-phosphate kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC1_9ACTN
Putative tagatose-6-phosphate kinase {ECO:0000313|EMBL:EEP44198.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_1094_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6245..7129)
DNA (885bp) protein (295aa)
Aldose 1-epimerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC2_9ACTN
Aldose 1-epimerase {ECO:0000313|EMBL:EEP44199.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
aldose-1-epimerase
L3_105_000G1_scaffold_1094_8
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7378..7905)
DNA (528bp) protein (176aa)
lacB; galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8B3_9ACTN
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:EEA91473.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_105_000G1_scaffold_1094_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7918..8346)
DNA (429bp) protein (143aa)
Galactose-6-phosphate isomerase, LacA subunit {ECO:0000313|EMBL:EEP44201.1}; EC=5.3.1.26 {ECO:0000313|EMBL:EEP44201.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Galactose-6-phosphate isomerase, LacA subunit n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC4_9ACTN
galactose-6-phosphate isomerase
L3_105_000G1_scaffold_1094_10
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8426..9160)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHK7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67055.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
lacR; lactose phosphotransferase system repressor LacR
L3_105_000G1_scaffold_1094_11
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9458..9796
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHK8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67056.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
lacF; lactose-specific phosphotransferase enzyme IIA component
L3_105_000G1_scaffold_1094_12
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9869..10915)
DNA (1047bp) protein (349aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67060.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
L3_105_000G1_scaffold_1094_13
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11304..11459
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67062.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
PTS system lactose-specific transporter subunit IIBC
L3_105_000G1_scaffold_1094_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11589..13664
DNA (2076bp) protein (692aa)
N-6 DNA methylase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WH94_EGGLE
N-6 DNA methylase {ECO:0000313|EMBL:ACV55485.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
N-6 DNA methylase
L3_105_000G1_scaffold_1094_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13661..14977
DNA (1317bp) protein (439aa)
Restriction endonuclease S subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJB9_ALIFI
restriction endonuclease S subunit
Restriction endonuclease S subunit {ECO:0000313|EMBL:AFL77087.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000G1_scaffold_1094_16
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14980..18405
DNA (3426bp) protein (1142aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WH92_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:ACV55483.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
hypothetical protein
L3_105_000G1_scaffold_1094_17
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18406..19785
DNA (1380bp) protein (460aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WH91_EGGLE
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ACV55482.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_105_000G1_scaffold_1094_18
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19782..20495
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUU9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI90656.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
hypothetical protein
L3_105_000G1_scaffold_1094_19
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20616..22355
DNA (1740bp) protein (580aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67062.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
lactose-specificiibc component
L3_105_000G1_scaffold_1094_20
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22485..23915
DNA (1431bp) protein (477aa)
6-phospho-beta-galactosidase {ECO:0000256|RuleBase:RU004469}; EC=3.2.1.- {ECO:0000256|RuleBase:RU004468};; EC=3.2.1.85 {ECO:0000256|RuleBase:RU004469};; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
lacG1; 6-phospho-beta-galactosidase (EC:3.2.1.85)
6-phospho-beta-galactosidase n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL5_9ACTN
L3_105_000G1_scaffold_1094_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24073..24855)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44202.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_1094_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24880..25488)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44203.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_105_000G1_scaffold_1094_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25504..26973)
DNA (1470bp) protein (490aa)
Arylsulfatase {ECO:0000313|EMBL:EEP44204.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEP44204.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Arylsulfatase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC7_9ACTN
sulfatase
L3_105_000G1_scaffold_1094_24
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27043..28143)
DNA (1101bp) protein (367aa)
Anaerobic sulfatase-maturating enzyme n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC8_9ACTN
Anaerobic sulfatase-maturating enzyme {ECO:0000313|EMBL:EEP44205.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
anaerobic sulfatase maturase
L3_105_000G1_scaffold_1094_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28247..29440)
DNA (1194bp) protein (398aa)
Arylsulfatase {ECO:0000313|EMBL:EEP44206.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEP44206.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Arylsulfatase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAC9_9ACTN
sulfatase
Displaying 25 items

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