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L3_105_000G1_scaffold_1602

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_1602_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(197..1594)
DNA (1398bp) protein (466aa)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD8_9ACTN
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEP43892.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L3_105_000G1_scaffold_1602_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1856..2245)
DNA (390bp) protein (130aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD7_9ACTN
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EEP43891.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
DtxR family iron (metal) dependent repressor
L3_105_000G1_scaffold_1602_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2413..3645)
DNA (1233bp) protein (411aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD5_9ACTN
L3_105_000G1_scaffold_1602_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3786..4937)
DNA (1152bp) protein (384aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD4_9ACTN
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEP43888.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
cell envelope-related transcriptional attenuator
L3_105_000G1_scaffold_1602_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4950..6257)
DNA (1308bp) protein (436aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD3_9ACTN
L3_105_000G1_scaffold_1602_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6323..6727)
DNA (405bp) protein (135aa)
ATP synthase epsilon chain n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD2_9ACTN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F1 subcomplex subunit epsilon
L3_105_000G1_scaffold_1602_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6733..8166)
DNA (1434bp) protein (478aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase subunit beta n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD1_9ACTN
ATP synthase F1 subcomplex subunit beta
L3_105_000G1_scaffold_1602_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8166..9077)
DNA (912bp) protein (304aa)
ATP synthase gamma chain n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBD0_9ACTN
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F1 subcomplex subunit gamma
L3_105_000G1_scaffold_1602_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9086..10702)
DNA (1617bp) protein (539aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase subunit alpha n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC9_9ACTN
ATP synthase F1 subcomplex subunit alpha
L3_105_000G1_scaffold_1602_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10707..11189)
DNA (483bp) protein (161aa)
ATP synthase subunit delta n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC8_9ACTN
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F1 subcomplex subunit delta
L3_105_000G1_scaffold_1602_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11182..11784)
DNA (603bp) protein (201aa)
ATP synthase subunit b n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC7_9ACTN
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F0 subunit B
L3_105_000G1_scaffold_1602_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11831..12025)
DNA (195bp) protein (65aa)
ATP synthase subunit C n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC6_9ACTN
ATP synthase subunit C {ECO:0000313|EMBL:EEP43880.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F0 subcomplex subunit C
L3_105_000G1_scaffold_1602_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12124..12924)
DNA (801bp) protein (267aa)
ATP synthase subunit a n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC5_9ACTN
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP synthase F0 subcomplex subunit A
L3_105_000G1_scaffold_1602_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12936..13226)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43878.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_1602_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13566..14213)
DNA (648bp) protein (216aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC3_9ACTN
L3_105_000G1_scaffold_1602_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14241..14702)
DNA (462bp) protein (154aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EEP43876.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEP43876.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC2_9ACTN
L3_105_000G1_scaffold_1602_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14869..16407)
DNA (1539bp) protein (513aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBC0_9ACTN
L3_105_000G1_scaffold_1602_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16656..17300)
DNA (645bp) protein (215aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB9_9ACTN
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EEP43873.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
SUA5/yciO/yrdC domain-containing protein
L3_105_000G1_scaffold_1602_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17315..18532)
DNA (1218bp) protein (406aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEP43872.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEP43872.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Aminotransferase, class I/II n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB8_9ACTN
bifunctional PLP-dependent enzyme
L3_105_000G1_scaffold_1602_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18557..18865)
DNA (309bp) protein (103aa)
Addiction module antidote protein HigA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB7_9ACTN
Addiction module antidote protein HigA {ECO:0000313|EMBL:EEP43871.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
XRE family plasmid maintenance system antidote protein
L3_105_000G1_scaffold_1602_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18878..19156)
DNA (279bp) protein (93aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB6_9ACTN
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EEP43870.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
plasmid maintenance system killer protein
L3_105_000G1_scaffold_1602_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19215..20384)
DNA (1170bp) protein (390aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Release factor glutamine methyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB5_9ACTN
protein-(glutamine-N5) methyltransferase
L3_105_000G1_scaffold_1602_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20624..20872)
DNA (249bp) protein (83aa)
Peptide chain release factor 1 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB4_9ACTN
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
peptide chain release factor 1 (bRF-1)
Displaying 23 items

View Taxonomy