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L3_105_000G1_scaffold_4378

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_4378_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAI6_9ACTN
homoserine O-succinyltransferase
L3_105_000G1_scaffold_4378_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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200..1417
DNA (1218bp) protein (406aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Putative L-lactate dehydrogenase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAI7_9ACTN
Putative L-lactate dehydrogenase {ECO:0000313|EMBL:EEP44121.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_105_000G1_scaffold_4378_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1890..2612)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T8_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EBA39606.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Transcriptional regulators
L3_105_000G1_scaffold_4378_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2744..3370)
DNA (627bp) protein (209aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI61_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA36289.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_105_000G1_scaffold_4378_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3460..4443)
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
SIS domain protein {ECO:0000313|EMBL:CDA36290.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted phosphosugar isomerases
L3_105_000G1_scaffold_4378_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4547..5014)
DNA (468bp) protein (156aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB {ECO:0000313|EMBL:CBK99373.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK99373.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZC4_9FIRM
L3_105_000G1_scaffold_4378_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5011..5436)
DNA (426bp) protein (142aa)
PTS system fructose IIA component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9U6_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:EBA39614.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS fructose transporter subunit IIA
L3_105_000G1_scaffold_4378_8
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5635..6492
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FA89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47311.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Xylose isomerase domain-containing protein TIM barrel
Displaying 8 items

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