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L3_105_000M1_scaffold_2004

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2004_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
Site-specific recombinase XerD n=3 Tax=root RepID=R7JND2_9BACT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDE65444.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
site-specific recombinase XerD
L3_105_000M1_scaffold_2004_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1023..2579
DNA (1557bp) protein (519aa)
FAD dependent oxidoreductase n=2 Tax=Alistipes RepID=B0MUP3_9BACT
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDE65445.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
FAD-dependent dehydrogenase
L3_105_000M1_scaffold_2004_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2583..3398
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MUP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65447.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_105_000M1_scaffold_2004_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3352..4197)
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MUP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65449.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
glycosyltransferase
L3_105_000M1_scaffold_2004_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4202..5296)
DNA (1095bp) protein (365aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EDS03754.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EDS03754.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
UDP-galactopyranose mutase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUP7_9BACT
wcfM; putative LPS biosynthesis related UDP-galactopyranose mutase
L3_105_000M1_scaffold_2004_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5309..6289)
DNA (981bp) protein (327aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS03755.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS03755.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUP8_9BACT
glycosyl transferase family protein
L3_105_000M1_scaffold_2004_7

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comp(6680..8116)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1T6D2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC68657.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_105_000M1_scaffold_2004_8
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8264..9163
DNA (900bp) protein (300aa)
Transposase IS4 family protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZCL3_ODOSD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADY34523.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_105_000M1_scaffold_2004_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9291..10223)
DNA (933bp) protein (311aa)
Glycosyltransferase group 2 family protein n=2 Tax=root RepID=R7JNE1_9BACT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDE65454.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
glycosyl transferase 2
L3_105_000M1_scaffold_2004_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11003..11743
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUQ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03759.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Protein of unknown function (DUF3298).
L3_105_000M1_scaffold_2004_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11855..11989)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03760.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_105_000M1_scaffold_2004_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12067..12651)
DNA (585bp) protein (195aa)
Sigma-70 region 2 n=3 Tax=root RepID=B0MUR5_9BACT
Sigma-70 region 2 {ECO:0000313|EMBL:CDE65461.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
sigma-70 family RNA polymerase sigma factor
L3_105_000M1_scaffold_2004_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12870..13811)
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=3 Tax=root RepID=B0MUR6_9BACT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EDS03762.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
cation diffusion facilitator family transporter
L3_105_000M1_scaffold_2004_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13808..14335)
DNA (528bp) protein (176aa)
Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=root RepID=B0MUR7_9BACT
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDS03763.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
5-nitroimidazole antibiotic resistance protein
L3_105_000M1_scaffold_2004_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14418..15902)
DNA (1485bp) protein (495aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=3 Tax=root RepID=B0MUR8_9BACT
L3_105_000M1_scaffold_2004_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16200..17753)
DNA (1554bp) protein (518aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUP0_9BACT
Outer membrane protein transport protein, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EDS03765.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Long-chain fatty acid transport protein
L3_105_000M1_scaffold_2004_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18002..19099)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03767.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
Displaying 17 items

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