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L3_105_000M1_scaffold_2525

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2525_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..650
DNA (648bp) protein (216aa)
CBS domain-containing protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8C9_9BACT
CBS domain-containing protein {ECO:0000313|EMBL:CDD24936.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Hemolysins and related proteins containing CBS domains
L3_105_000M1_scaffold_2525_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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740..1324
DNA (585bp) protein (195aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
PPIC-type PPIASE family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z370_9BACT
PPIC-type PPIASE family protein
L3_105_000M1_scaffold_2525_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1291..2529
DNA (1239bp) protein (413aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes onderdonkii RepID=UPI000374A0BB
PPIC-type PPIASE family protein
L3_105_000M1_scaffold_2525_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2639..3781
DNA (1143bp) protein (381aa)
alcohol dehydrogenase n=1 Tax=Alistipes onderdonkii RepID=UPI00037083E8
Putative NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CDD24938.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Fe-dependent oxidoreductase, alcohol dehydrogenase
L3_105_000M1_scaffold_2525_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3863..6001)
DNA (2139bp) protein (713aa)
methylmalonyl-CoA mutase n=1 Tax=Alistipes onderdonkii RepID=UPI00036D5A29
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:CDD24939.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methylmalonyl-CoA mutase
L3_105_000M1_scaffold_2525_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6004..7854)
DNA (1851bp) protein (617aa)
methylmalonyl-CoA mutase n=1 Tax=Alistipes onderdonkii RepID=UPI000376112D
Methylmalonyl-CoA mutase N-terminal domain/subunit {ECO:0000313|EMBL:CDD24940.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
L3_105_000M1_scaffold_2525_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8439..10619
DNA (2181bp) protein (727aa)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8D5_9BACT
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDD24941.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamine synthetase
L3_105_000M1_scaffold_2525_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10885..11565
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M7D2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR59183.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_105_000M1_scaffold_2525_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11590..12411
DNA (822bp) protein (274aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMR6_9BACT
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:CDD24943.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N-acetylglucosamine kinase
L3_105_000M1_scaffold_2525_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12401..13216
DNA (816bp) protein (272aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y126_9BACT
sugar phosphate isomerase
L3_105_000M1_scaffold_2525_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13197..15107
DNA (1911bp) protein (637aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTF5_9BACT
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:CDD24945.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_2525_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15201..16310
DNA (1110bp) protein (370aa)
competence protein ComEA n=1 Tax=Alistipes onderdonkii RepID=UPI00036D0C87
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:CDD24946.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA uptake protein and related DNA-binding proteins
L3_105_000M1_scaffold_2525_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16352..16543
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z382_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SSU ribosomal protein S21P
L3_105_000M1_scaffold_2525_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16783..17070
DNA (288bp) protein (96aa)
Putative transcriptional regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMS1_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:CDD24948.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_105_000M1_scaffold_2525_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17073..19103
DNA (2031bp) protein (677aa)
Peptidase M56 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y130_9BACT
Peptidase M56 family {ECO:0000313|EMBL:CDD24949.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antirepressor regulating drug resistance protein
L3_105_000M1_scaffold_2525_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19246..20667
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037D0DD2
KWG repeat protein {ECO:0000313|EMBL:CDD24950.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
KWG repeat-containing protein
L3_105_000M1_scaffold_2525_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20764..22605)
DNA (1842bp) protein (614aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8F0_9BACT
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:CDD24951.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein/protective antigen OMA87
L3_105_000M1_scaffold_2525_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22920..23300)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=E4MEA2_9BACT
Putative DnaK suppressor protein {ECO:0000313|EMBL:CDD24952.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DnaK suppressor protein
L3_105_000M1_scaffold_2525_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23464..26865)
DNA (3402bp) protein (1134aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XMS8_9BACT
L3_105_000M1_scaffold_2525_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27027..28133)
DNA (1107bp) protein (369aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
PAS domain S-box protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y135_9BACT
PAS domain-containing protein
L3_105_000M1_scaffold_2525_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28302..29294)
DNA (993bp) protein (331aa)
PAS domain S-box n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTG6_9BACT
PAS domain S-box {ECO:0000313|EMBL:CDD24955.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
PAS domain-containing protein
L3_105_000M1_scaffold_2525_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29320..29868)
DNA (549bp) protein (183aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8F8_9BACT
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:CDD24956.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase
L3_105_000M1_scaffold_2525_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29887..31716)
DNA (1830bp) protein (610aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035C7D1B
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AFL78726.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_2525_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31866..32276)
DNA (411bp) protein (137aa)
ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y167_9BACT
Ribonuclease HI {ECO:0000313|EMBL:CDD24979.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Displaying 24 items

View Taxonomy