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L3_105_000M1_scaffold_2905

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2905_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..800
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTW6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25070.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_2905_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1127..1387
DNA (261bp) protein (87aa)
transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI000381ADBF
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDD25069.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
nucleoid DNA-binding protein
L3_105_000M1_scaffold_2905_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1449..2615
DNA (1167bp) protein (389aa)
Aspartate aminotransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XN49_9BACT
Aspartate aminotransferase {ECO:0000313|EMBL:CDD25068.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartate/tyrosine/aromatic aminotransferase
L3_105_000M1_scaffold_2905_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2844..4310
DNA (1467bp) protein (489aa)
Long-chain fatty acid transport protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z3M6_9BACT
Long-chain fatty acid transport protein {ECO:0000313|EMBL:CDD25067.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
long-chain fatty acid transport protein
L3_105_000M1_scaffold_2905_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4574..5779
DNA (1206bp) protein (402aa)
L-serine deaminase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVQ8_9BACT
L-serine deaminase {ECO:0000313|EMBL:CDD25735.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L-serine deaminase
L3_105_000M1_scaffold_2905_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6461..10720)
DNA (4260bp) protein (1420aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAR7_9BACT
L3_105_000M1_scaffold_2905_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10755..14285)
DNA (3531bp) protein (1177aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Alistipes onderdonkii RepID=UPI000372CAE2
DNA-directed RNA polymerase subunit beta
L3_105_000M1_scaffold_2905_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14528..14905)
DNA (378bp) protein (126aa)
50S ribosomal protein L7 n=1 Tax=Alistipes onderdonkii RepID=UPI0003705B63
50S ribosomal protein L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_2905_9
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14949..15293)
DNA (345bp) protein (115aa)
50S ribosomal protein L10 n=1 Tax=Alistipes onderdonkii RepID=UPI000360F325
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
50S ribosomal protein L10
Displaying 9 items

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