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L3_105_000M1_scaffold_2992

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2992_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..283
DNA (282bp) protein (94aa)
dihydrofolate reductase n=1 Tax=Alistipes onderdonkii RepID=UPI000370A35C
Peptidase family M49 {ECO:0000313|EMBL:CDD25003.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
topoisomerase IA
L3_105_000M1_scaffold_2992_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(337..1857)
DNA (1521bp) protein (507aa)
Beta-xylosidase (1 4-beta-D-xylan xylosidase) n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1C1_9BACT
Beta-xylosidase (1 4-beta-D-xylan xylosidase) {ECO:0000313|EMBL:CDD25004.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycoside hydrolase family protein
L3_105_000M1_scaffold_2992_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2045..2209)
DNA (165bp) protein (55aa)
Rubredoxin n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTR2_9BACT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
rubredoxin
L3_105_000M1_scaffold_2992_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2349..2888)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8Q5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25006.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_2992_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2872..3582)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00035EC02E
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_105_000M1_scaffold_2992_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3567..4184)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XN06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25008.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_2992_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4232..5527)
DNA (1296bp) protein (432aa)
metalloendopeptidase n=1 Tax=Alistipes onderdonkii RepID=UPI00036C046E
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL78758.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_2992_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5675..6718
DNA (1044bp) protein (348aa)
lipid-A-disaccharide kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
lipid-A-disaccharide kinase n=1 Tax=Alistipes onderdonkii RepID=UPI000372FEDA
L3_105_000M1_scaffold_2992_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6702..7508
DNA (807bp) protein (269aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Purine nucleoside phosphorylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR68_9BACT
purine nucleoside phosphorylase I
L3_105_000M1_scaffold_2992_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7512..8003
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4F9_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
single stranded DNA-binding protein
L3_105_000M1_scaffold_2992_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8435..9169)
DNA (735bp) protein (245aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XX36_9BACT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDD26205.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
short-chain dehydrogenase
L3_105_000M1_scaffold_2992_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9600..10037)
DNA (438bp) protein (146aa)
CMP deaminase n=1 Tax=Alistipes onderdonkii RepID=UPI00036EFAAD
deoxycytidylate deaminase
Deoxycytidylate deaminase {ECO:0000313|EMBL:CCZ76073.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_105_000M1_scaffold_2992_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10067..11269)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z6S3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26207.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative lipoprotein
L3_105_000M1_scaffold_2992_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11297..13552)
DNA (2256bp) protein (752aa)
preprotein translocase subunit SecA n=1 Tax=Alistipes onderdonkii RepID=UPI0003824FAA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Preprotein translocase subunit SecA
L3_105_000M1_scaffold_2992_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13584..14504
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8Y4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25101.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_2992_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14672..15376)
DNA (705bp) protein (235aa)
Glycosyl transferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z3Q1_9BACT
Glycosyl transferase {ECO:0000313|EMBL:CDD25102.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyl transferase family protein
Displaying 16 items

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