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L3_105_000M1_scaffold_1509

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1509_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..187
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6P6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24331.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1509_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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280..2220
DNA (1941bp) protein (647aa)
alpha-glucosidase n=1 Tax=Alistipes onderdonkii RepID=UPI000364CD12
Uncharacterized protein {ECO:0000313|EMBL:EFR57553.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycoside hydrolase
L3_105_000M1_scaffold_1509_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2361..3461)
DNA (1101bp) protein (367aa)
De-hypoxanthine futalosine cyclase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL15_9BACT
De-hypoxanthine futalosine cyclase {ECO:0000313|EMBL:CDD24333.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
de-hypoxanthine futalosine cyclase
L3_105_000M1_scaffold_1509_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3464..5698)
DNA (2235bp) protein (745aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ51_9BACT
L3_105_000M1_scaffold_1509_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5695..6807)
DNA (1113bp) protein (371aa)
Amidohydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRR6_9BACT
Amidohydrolase {ECO:0000313|EMBL:CDD24335.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
amidohydrolase
L3_105_000M1_scaffold_1509_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6817..7782)
DNA (966bp) protein (322aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6Q2_9BACT
L3_105_000M1_scaffold_1509_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7789..11403)
DNA (3615bp) protein (1205aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1I9_9BACT
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:CDD24337.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_1509_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11404..12195)
DNA (792bp) protein (264aa)
Glutamine cyclotransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL17_9BACT
Glutamine cyclotransferase {ECO:0000313|EMBL:CDD24338.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glutamine cyclotransferase
L3_105_000M1_scaffold_1509_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12548..13873
DNA (1326bp) protein (442aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ55_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) {ECO:0000313|EMBL:CDD24339.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_1509_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14132..14800
DNA (669bp) protein (223aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRR8_9BACT
protease subunit of ATP-dependent protease
L3_105_000M1_scaffold_1509_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14800..16077
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6Q7_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
endopeptidase Clp ATP-binding regulatory subunit ClpX
L3_105_000M1_scaffold_1509_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16140..18173
DNA (2034bp) protein (678aa)
transketolase n=1 Tax=Alistipes onderdonkii RepID=UPI0003829256
Transketolase {ECO:0000313|EMBL:CDD24342.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transketolase
L3_105_000M1_scaffold_1509_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18398..18793)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000369D4FE
Uncharacterized protein {ECO:0000313|EMBL:CDD24343.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1509_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19184..20488
DNA (1305bp) protein (435aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Alistipes onderdonkii RepID=UPI000377B17B
L3_105_000M1_scaffold_1509_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20653..22125
DNA (1473bp) protein (491aa)
Serine protease MucD n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRS2_9BACT
Serine protease MucD {ECO:0000313|EMBL:CDD24345.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
periplasmic serine protease, Do/DeqQ family
L3_105_000M1_scaffold_1509_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22186..23046
DNA (861bp) protein (287aa)
RNA polymerase sigma factor, sigma-70 family n=3 Tax=Alistipes RepID=D4IP86_9BACT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCZ96021.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_105_000M1_scaffold_1509_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23118..24014)
DNA (897bp) protein (299aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
1,4-dihydroxy-2-naphthoate prenyltransferase (EC:2.5.1.74)
1 4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1J8_9BACT
L3_105_000M1_scaffold_1509_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24049..24711)
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL26_9BACT
Displaying 18 items

View Taxonomy