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L3_105_000M1_scaffold_1688

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1688_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..238
DNA (237bp) protein (79aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7Y0_9BACT
L3_105_000M1_scaffold_1688_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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238..1137
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000364B106
protein-(glutamine-N5) methyltransferase
Protein-(Glutamine-N5) methyltransferase release factor-specific {ECO:0000313|EMBL:CCZ75256.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_105_000M1_scaffold_1688_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1119..1631
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0K0_9BACT
Regulatory protein RecX {ECO:0000313|EMBL:CDD24804.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1688_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1616..3343
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003618CDE
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL76585.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_1688_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3402..3788
DNA (387bp) protein (129aa)
Putative polar-differentiation response regulator DivK n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL05_9BACT
Putative polar-differentiation response regulator DivK {ECO:0000313|EMBL:CDD24323.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
CheY-like receiver domain-containing protein
L3_105_000M1_scaffold_1688_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3826..5967
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1H4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24322.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
two-component system sensor histidine kinase
L3_105_000M1_scaffold_1688_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5964..7277
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6N3_9BACT
two-component system sensor histidine kinase
L3_105_000M1_scaffold_1688_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7629..10769
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRQ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24320.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1688_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10783..12192
DNA (1410bp) protein (470aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ38_9BACT
L-arabinose isomerase
L3_105_000M1_scaffold_1688_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12198..13097)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003660E47
Uncharacterized protein {ECO:0000313|EMBL:CDD24318.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_105_000M1_scaffold_1688_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13648..14202
DNA (555bp) protein (185aa)
30S ribosomal protein S16 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1H0_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
30S ribosomal protein S16
L3_105_000M1_scaffold_1688_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14455..14985
DNA (531bp) protein (177aa)
Ribosome maturation factor RimM n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6M9_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
16S rRNA processing protein RimM
L3_105_000M1_scaffold_1688_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15000..16406
DNA (1407bp) protein (469aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP7_9BACT
L3_105_000M1_scaffold_1688_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17052..17279
DNA (228bp) protein (76aa)
Helix-turn-helix protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UHR9_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:CCZ75264.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Helix-turn-helix protein
L3_105_000M1_scaffold_1688_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17289..18242
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24313.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1688_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18414..21143
DNA (2730bp) protein (910aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase n=1 Tax=Alistipes onderdonkii RepID=UPI000375496F
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD24312.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_1688_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21332..21820
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00038041F6
Uncharacterized protein {ECO:0000313|EMBL:CDD24311.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_1688_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22123..22560
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24310.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
Displaying 18 items

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