ggKbase home page

L3_105_000M1_scaffold_5234

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_5234_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..309
DNA (309bp) protein (103aa)
Putative exported protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVY0_9BACT
Putative exported protein {ECO:0000313|EMBL:CDD25810.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_5234_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

684..2660
DNA (1977bp) protein (659aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y3B5_9BACT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD25809.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC transporter ATPase
L3_105_000M1_scaffold_5234_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2549..3328)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XQ45_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25808.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_5234_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3522..4172)
DNA (651bp) protein (217aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
endonuclease III (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5L1_9BACT
L3_105_000M1_scaffold_5234_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4169..5104)
DNA (936bp) protein (312aa)
glycosyl transferase family 2 n=1 Tax=Alistipes onderdonkii RepID=UPI000362717D
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCZ95897.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Glycosyltransferases involved in cell wall biogenesis
L3_105_000M1_scaffold_5234_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5110..7647)
DNA (2538bp) protein (846aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Putative ATP-dependent helicase PcrA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVX4_9BACT
DNA/RNA helicase
L3_105_000M1_scaffold_5234_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8133..9131
DNA (999bp) protein (333aa)
MoxR-like ATPase n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAY7_9BACT
MoxR-like ATPase {ECO:0000313|EMBL:CDD25801.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
MoxR-like ATPase
L3_105_000M1_scaffold_5234_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9134..10018
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25800.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_5234_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10015..10344
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y3A5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25799.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_5234_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10314..10643
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000362E8DB
Uncharacterized protein {ECO:0000313|EMBL:CDD25799.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
Displaying 10 items

View Taxonomy