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L3_105_000M1_scaffold_33

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Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_33_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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183..524
DNA (342bp) protein (114aa)
Uncharacterized protein n=125 Tax=Enterobacteriaceae RepID=A7ZPK8_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP07809.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_105_000M1_scaffold_33_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(515..1441)
DNA (927bp) protein (309aa)
Uncharacterized HTH-type transcriptional regulator YfeR n=529 Tax=Enterobacteriaceae RepID=YFER_ECOLI
yfeR; putative DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EFZ55986.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_105_000M1_scaffold_33_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1531..2529
DNA (999bp) protein (333aa)
Transporter, bile acid/Na+ symporter family n=191 Tax=Enterobacteriaceae RepID=A7ZPL0_ECO24
hypothetical protein
Putative hydrolase {ECO:0000313|EMBL:EKJ13997.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L3_105_000M1_scaffold_33_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2526..2744)
DNA (219bp) protein (73aa)
Putative cytoplasmic protein n=1 Tax=Escherichia coli M718 RepID=F4TH81_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK12499.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L3_105_000M1_scaffold_33_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2746..4761)
DNA (2016bp) protein (672aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
DNA ligase n=338 Tax=Enterobacteriaceae RepID=DNLJ_ECO24
L3_105_000M1_scaffold_33_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4832..5818)
DNA (987bp) protein (329aa)
Cell division protein ZipA homolog n=2 Tax=Shigella flexneri RepID=I0VFA7_SHIFL
zipA; cell division protein ZipA
Cell division protein ZipA homolog {ECO:0000256|HAMAP-Rule:MF_00509, ECO:0000256|SAAS:SAAS00054614}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_105_000M1_scaffold_33_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6048..6809
DNA (762bp) protein (254aa)
Protein CysZ n=286 Tax=Enterobacteriaceae RepID=CYSZ_ECO55
cysZ; putative inner membrane protein
Sulfate transporter CysZ {ECO:0000256|HAMAP-Rule:MF_00468}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_000M1_scaffold_33_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6994..7965
DNA (972bp) protein (324aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
Cysteine synthase A n=1324 Tax=Enterobacteriaceae RepID=CYSK_ECO57
cysteine synthase A
L3_105_000M1_scaffold_33_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8349..8606
DNA (258bp) protein (86aa)
Phosphocarrier protein HPr n=2066 Tax=Enterobacteriaceae RepID=PTHP_ECO57
PTS sugar transporter
Phosphocarrier protein HPr {ECO:0000313|EMBL:ESD28963.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_105_000M1_scaffold_33_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8651..10378
DNA (1728bp) protein (576aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=924 Tax=Enterobacteriaceae RepID=C3T127_ECOLX
L3_105_000M1_scaffold_33_11
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10419..10928
DNA (510bp) protein (170aa)
Glucose-specific phosphotransferase enzyme IIA component n=1358 Tax=Enterobacteriaceae RepID=PTGA_ECOL6
glucose-specific PTS system component
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EOW63309.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
L3_105_000M1_scaffold_33_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10970..11821)
DNA (852bp) protein (284aa)
pdxK; hydroxymethylpyrimidine kinase (EC:2.7.1.35)
Pyridoxine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; EC=2.7.1.35 {ECO:0000256|HAMAP-Rule:MF_01638};; PN/PL/PM kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxal kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxamine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Vitamin B6 kinase {ECO:0000256|HAMAP-Rule:MF_01638}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
Pyridoxine kinase n=179 Tax=Enterobacteriaceae RepID=PDXK_ECO24
L3_105_000M1_scaffold_33_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11926..12294
DNA (369bp) protein (123aa)
Uncharacterized protein n=365 Tax=Enterobacteriaceae RepID=J7QG51_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD28959.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_105_000M1_scaffold_33_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12297..13208)
DNA (912bp) protein (304aa)
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Cysteine synthase B, O-acetylserine sulfhydrolase B n=259 Tax=Enterobacteriaceae RepID=J7R3M5_ECOLX
L3_105_000M1_scaffold_33_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13342..14439)
DNA (1098bp) protein (366aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
Sulfate/thiosulfate ABC transporter, ATP-binding protein n=230 Tax=Enterobacteriaceae RepID=A7ZPM2_ECO24
sulfate/thiosulfate transporter subunit
L3_105_000M1_scaffold_33_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14429..15304)
DNA (876bp) protein (292aa)
Sulfate transport system permease protein CysW n=857 Tax=Enterobacteriaceae RepID=CYSW_ECOL6
Sulfate transport system permease protein
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:EFK72428.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_105_000M1_scaffold_33_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..16137)
DNA (834bp) protein (278aa)
Sulfate abc transporter, permease protein cyst n=133 Tax=Escherichia coli RepID=J7QTX8_ECOLX
sulfate/thiosulfate transporter subunit
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:KEN99001.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L3_105_000M1_scaffold_33_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16137..17153)
DNA (1017bp) protein (339aa)
Thiosulfate binding protein n=500 Tax=Escherichia coli RepID=C3T0Y7_ECOLX
cysP; thiosulfate transporter subunit
Thiosulfate-binding protein {ECO:0000313|EMBL:END51837.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L3_105_000M1_scaffold_33_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17324..18115)
DNA (792bp) protein (264aa)
Oxidoreductase UcpA n=443 Tax=Enterobacteriaceae RepID=UCPA_ECOLI
putative short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:KDV64287.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_105_000M1_scaffold_33_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18244..19101)
DNA (858bp) protein (286aa)
HTH-type transcriptional regulator MurR n=170 Tax=Escherichia coli RepID=MURR_ECO24
RpiR family transcriptional regulator
HTH-type transcriptional regulator MurR {ECO:0000256|HAMAP-Rule:MF_02108}; MurPQ operon repressor {ECO:0000256|HAMAP-Rule:MF_02108}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_105_000M1_scaffold_33_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19265..20161
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
N-acetylmuramic acid 6-phosphate etherase n=293 Tax=Enterobacteriaceae RepID=MURQ_ECO24
RpiR family transcriptional regulator
L3_105_000M1_scaffold_33_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20165..21589
DNA (1425bp) protein (475aa)
PTS system, N-acetylmuramic acid-specific EIIBC component n=275 Tax=Enterobacteriaceae RepID=A7ZPM9_ECO24
murP; PTS system N-acetylmuramic acid transporter subunits EIIBC
PTS system N-acetylmuramic acid transporter subunits IIBC {ECO:0000313|EMBL:EZA30136.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L3_105_000M1_scaffold_33_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21594..22898
DNA (1305bp) protein (435aa)
UPF0214 protein YfeW n=297 Tax=Enterobacteriaceae RepID=J7QG58_ECOLX
yfeW; periplasmic esterase
UPF0214 protein YfeW {ECO:0000256|HAMAP-Rule:MF_01034}; Flags: Precursor;; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_105_000M1_scaffold_33_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22956..23855)
DNA (900bp) protein (300aa)
Uncharacterized protein n=843 Tax=Enterobacteriaceae RepID=J7Q8S2_ECOLX
yfeX; dyp-type peroxidase family protein
Dyp-type peroxidase {ECO:0000313|EMBL:EOV72526.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_000M1_scaffold_33_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23951..24526)
DNA (576bp) protein (192aa)
Uncharacterized protein n=426 Tax=Enterobacteriaceae RepID=C3T0V2_ECOLX
RpoE-regulated lipoprotein
RpoE-regulated lipoprotein {ECO:0000313|EMBL:AFS73356.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L3_105_000M1_scaffold_33_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24587..25036)
DNA (450bp) protein (150aa)
Uncharacterized protein n=247 Tax=Enterobacteriaceae RepID=C3T0U7_ECOLX
yfeZ; hypothetical protein
Inner membrane protein yfeZ {ECO:0000313|EMBL:ELD98327.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_105_000M1_scaffold_33_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25023..25448)
DNA (426bp) protein (142aa)
Acetyltransferase YpeA {ECO:0000256|HAMAP-Rule:MF_01127}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01127};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
UPI00005E351D related cluster n=1 Tax=unknown RepID=UPI00005E351D
ypeA; acyltransferase
L3_105_000M1_scaffold_33_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25662..26531
DNA (870bp) protein (290aa)
N-acetylmuramoyl-l-alanine amidase I n=619 Tax=Enterobacteriaceae RepID=C3T0T7_ECOLX
amiA; N-acetylmuramoyl-l-alanine amidase I
N-acetylmuramoyl-L-alanine amidase AmiA {ECO:0000313|EMBL:EOV77330.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_105_000M1_scaffold_33_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26535..27434
DNA (900bp) protein (300aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
Coproporphyrinogen-III oxidase, aerobic n=18 Tax=Escherichia coli RepID=HEM6_ECOSE
coproporphyrinogen III oxidase
L3_105_000M1_scaffold_33_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27440..28492)
DNA (1053bp) protein (351aa)
Predicted DNA-binding transcriptional regulator, ARAC-type n=282 Tax=Enterobacteriaceae RepID=C8U7W6_ECO10
yfeG; DNA-binding transcriptional regulator, ARAC-type
AraC family transcriptional regulator {ECO:0000313|EMBL:EFE63056.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Displaying items 1-30 of 176 in total

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