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L3_105_000M1_scaffold_42

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Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_42_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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218..367
DNA (150bp) protein (50aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=E8Y3K5_ECOKO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX50418.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
L3_105_000M1_scaffold_42_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

381..1997
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 195 (3-7155360) RepID=T7TU35_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:BAG77787.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
hypothetical protein
L3_105_000M1_scaffold_42_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1970..7483
DNA (5514bp) protein (1838aa)
Adhesin n=1 Tax=Escherichia coli HVH 195 (3-7155360) RepID=T7T9L1_ECOLX
Putative invasin {ECO:0000313|EMBL:ABV16846.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
invasin
L3_105_000M1_scaffold_42_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7745..8797)
DNA (1053bp) protein (351aa)
Glycosyl transferase family 9 n=75 Tax=Escherichia coli RepID=J7Q855_ECOLX
hypothetical protein
Glycosyltransferase 9 family protein {ECO:0000313|EMBL:KDX28395.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L3_105_000M1_scaffold_42_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9112..10428
DNA (1317bp) protein (439aa)
Shikimate transporter n=56 Tax=Enterobacteriaceae RepID=B1LPW5_ECOSM
shiA; shikimate transporter ShiA
Shikimate transporter {ECO:0000313|EMBL:CDL28967.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
L3_105_000M1_scaffold_42_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..11984
DNA (1455bp) protein (485aa)
amn; AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
AMP nucleosidase n=1 Tax=Escherichia coli W26 RepID=I0VRR4_ECOLX
L3_105_000M1_scaffold_42_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12327..13043
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein YeeN n=793 Tax=Enterobacteriaceae RepID=YEEN_ECOL5
yeeN; hypothetical protein
Probable transcriptional regulatory protein YeeN {ECO:0000256|HAMAP-Rule:MF_00918}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_105_000M1_scaffold_42_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13671..15125)
DNA (1455bp) protein (485aa)
MATE efflux family protein n=5 Tax=Escherichia coli RepID=B1LPW1_ECOSM
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:ACB20148.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
L3_105_000M1_scaffold_42_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15432..16382)
DNA (951bp) protein (317aa)
Transcriptional regulator cys regulon accessory regulatory circuit affecting cysM n=46 Tax=Escherichia coli RepID=J7R5S8_ECOLX
cbl; DNA-binding transcriptional activator Cbl of cysteine biosynthesis
Transcriptional regulator Cbl {ECO:0000313|EMBL:EJE59403.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L3_105_000M1_scaffold_42_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16484..17401)
DNA (918bp) protein (306aa)
Nitrogen assimilation control protein n=74 Tax=Enterobacteriaceae RepID=J7QSK8_ECOLX
nitrogen assimilation transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:ESD77525.1}; TaxID=1268995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908525.;"
L3_105_000M1_scaffold_42_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17792..18697)
DNA (906bp) protein (302aa)
L,D-transpeptidase linking Lpp to murein n=1 Tax=Escherichia coli BIDMC 39 RepID=V2Z2D4_ECOLX
Protein ErfK/srfK {ECO:0000313|EMBL:ESD03925.1}; TaxID=1268982 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907672.;"
hypothetical protein
L3_105_000M1_scaffold_42_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18759..19838)
DNA (1080bp) protein (360aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=39 Tax=Escherichia coli RepID=COBT_ECO24
cobT; nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase
L3_105_000M1_scaffold_42_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19850..20593)
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Cobalamin synthase n=425 Tax=Enterobacteriaceae RepID=COBS_ECO24
cobS; cobalamin synthase
L3_105_000M1_scaffold_42_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20590..21132)
DNA (543bp) protein (181aa)
Adenosylcobinamide kinase (EC:2.7.1.156 2.7.7.62)
Bifunctional adenosylcobalamin biosynthesis protein CobU {ECO:0000313|EMBL:EFU32417.1}; EC=2.7.1.156 {ECO:0000313|EMBL:EFU32417.1};; EC=2.7.7.62 {ECO:0000313|EMBL:EFU32417.1};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Cobinamide kinase/cobinamide phosphate guanylyltransferase n=190 Tax=Enterobacteriaceae RepID=J7R5T2_ECOLX
L3_105_000M1_scaffold_42_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21269..21706)
DNA (438bp) protein (146aa)
Cobalamin biosynthesis family protein n=16 Tax=Escherichia coli RepID=A7ZNF8_ECO24
cobalamin biosynthesis family protein
Cobalamin biosynthesis protein {ECO:0000313|EMBL:KHJ15840.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_000M1_scaffold_42_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22188..23102)
DNA (915bp) protein (305aa)
Regulatory protein pocR n=38 Tax=Escherichia coli RepID=E7J6Z1_ECOLX
Histidine kinase sensor domain protein {ECO:0000313|EMBL:EIH25707.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
pocR; regulatory protein PocR
L3_105_000M1_scaffold_42_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23305..24114)
DNA (810bp) protein (270aa)
Aquaglyceroporin n=8 Tax=Escherichia coli RepID=U9XGY4_ECOLX
Aquaglyceroporin {ECO:0000313|EMBL:ESA76119.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
pduF; propanediol diffusion facilitator
L3_105_000M1_scaffold_42_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24626..24910
DNA (285bp) protein (95aa)
E24377A n=157 Tax=Escherichia coli RepID=Q1RPE2_ECOLX
putative propanediol utilization polyhedral bodies PduA-like protein
Propanediol utilization protein PduA {ECO:0000313|EMBL:ELE55945.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_105_000M1_scaffold_42_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24907..25719
DNA (813bp) protein (271aa)
BMC domain protein n=12 Tax=Escherichia coli RepID=H4X6P2_ECOLX
Propanediol utilization protein {ECO:0000313|EMBL:KDV56581.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
propanediol utilization protein PduB
L3_105_000M1_scaffold_42_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25738..27402
DNA (1665bp) protein (555aa)
Propanediol utilization dehydratase, large subunit {ECO:0000313|EMBL:ABV19028.1}; EC=4.2.1.30 {ECO:0000313|EMBL:ABV19028.1};; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
pduC; propanediol utilization dehydratase, large subunit (EC:4.2.1.30)
Propanediol utilization dehydratase, large subunit n=40 Tax=Enterobacteriaceae RepID=A7ZNG3_ECO24
L3_105_000M1_scaffold_42_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27412..28080
DNA (669bp) protein (223aa)
Propanediol utilization dehydratase, medium subunit n=39 Tax=Escherichia coli RepID=A7ZNG4_ECO24
pduD; propanediol utilization dehydratase, medium subunit
Propanediol utilization dehydratase, medium subunit {ECO:0000313|EMBL:ABV17223.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L3_105_000M1_scaffold_42_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28095..28613
DNA (519bp) protein (173aa)
Dehydratase small subunit n=44 Tax=Enterobacteriaceae RepID=D7Y8G3_ECOLX
pduE; propanediol utilization diol dehydratase small subunit
Putative glycerol dehydratase, small subunit {ECO:0000313|EMBL:ESA76114.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
L3_105_000M1_scaffold_42_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28623..29822
DNA (1200bp) protein (400aa)
Diol dehydratase-reactivating factor large subunit n=1 Tax=Escherichia coli P0302308.3 RepID=N3H488_ECOLX
pduG; propanediol utilization diol dehydratase reactivation protein
Diol dehydratase reactivase ATPase-like domain protein {ECO:0000313|EMBL:EIH25424.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_105_000M1_scaffold_42_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29819..30454
DNA (636bp) protein (212aa)
Diol dehydratase / glycerol dehydratase reactivase large subunit n=20 Tax=Escherichia coli RepID=D7Y8G4_ECOLX
Glycerol dehydratase {ECO:0000313|EMBL:KDV56577.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
pduG; propanediol utilization diol dehydratase reactivation protein
L3_105_000M1_scaffold_42_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30444..30794
DNA (351bp) protein (117aa)
Propanediol utilization protein PduH domain protein n=9 Tax=Escherichia coli RepID=I2SXP5_ECOLX
Propanediol utilization protein PduH domain protein {ECO:0000313|EMBL:EIH25566.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
propanediol dehydratase reactivation protein PduH
L3_105_000M1_scaffold_42_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30814..31089
DNA (276bp) protein (92aa)
Propanediol utilization protein: polyhedral bodies n=203 Tax=Enterobacteriaceae RepID=Q1RPD5_ECOLX
carboxysome structural protein EutM
Major carboxysome shell protein 1A {ECO:0000313|EMBL:ESA89561.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_105_000M1_scaffold_42_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31113..31535
DNA (423bp) protein (141aa)
Propanediol utilization protein PduK n=44 Tax=Enterobacteriaceae RepID=A7ZNG8_ECO24
pduK; propanediol utilization protein PduK
Microcompartment protein {ECO:0000313|EMBL:KDV56574.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_105_000M1_scaffold_42_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31538..32170
DNA (633bp) protein (211aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
Phosphate propanoyltransferase n=23 Tax=Escherichia coli RepID=A7ZNG9_ECO24
pduL; propanediol utilization protein PduL
L3_105_000M1_scaffold_42_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32167..32658
DNA (492bp) protein (164aa)
Propanediol utilization protein PduM n=35 Tax=Escherichia coli RepID=A7ZNH0_ECO24
pduM; propanediol utilization protein PduM
Uncharacterized protein {ECO:0000313|EMBL:EII24159.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_105_000M1_scaffold_42_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32662..32937
DNA (276bp) protein (92aa)
Propanediol utilization protein PduN n=43 Tax=Escherichia coli RepID=A7ZNH1_ECO24
pduN; propanediol utilization protein PduN
Propanediol utilization polyhedral body protein PduN {ECO:0000313|EMBL:CDL28996.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
Displaying items 1-30 of 184 in total

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