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L3_105_000M1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_60_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..321
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37265.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_105_000M1_scaffold_60_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(694..1104)
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QKX1_9CLOT
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
formylmethionine deformylase
L3_105_000M1_scaffold_60_3
unknown

Not on your lists

1138..1302
DNA (165bp) protein (55aa)

This feature has no annotations

L3_105_000M1_scaffold_60_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1427..2953
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QWA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37254.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_60_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2950..3591
DNA (642bp) protein (214aa)
HAD hydrolase family IA variant 3 n=1 Tax=Clostridium sp. CAG:352 RepID=R6RS41_9CLOT
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDC37252.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
haloacid dehalogenase
L3_105_000M1_scaffold_60_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3901..4374
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QWA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37249.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_60_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4384..5670
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37246.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_60_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5670..6902
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QKV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37243.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_60_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6915..7577
DNA (663bp) protein (221aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN72_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC37240.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_60_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7972..9426
DNA (1455bp) protein (485aa)
anthranilate synthase (EC:4.1.3.27)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RS29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37237.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_60_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9446..10009
DNA (564bp) protein (188aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW88_9CLOT
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:CDC37234.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutamine amidotransferase of anthranilate synthase
L3_105_000M1_scaffold_60_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10416..11429
DNA (1014bp) protein (338aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCT4_9CLOT
anthranilate phosphoribosyltransferase
L3_105_000M1_scaffold_60_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11447..12223
DNA (777bp) protein (259aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY55_9CLOT
L3_105_000M1_scaffold_60_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12238..12846
DNA (609bp) protein (203aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R690_9CLOT
phosphoribosylanthranilate isomerase
L3_105_000M1_scaffold_60_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12849..14033
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVQ7_9CLOT
L3_105_000M1_scaffold_60_16
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13987..14802
DNA (816bp) protein (272aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Tryptophan synthase alpha chain n=1 Tax=Clostridium sp. CAG:352 RepID=R6S267_9CLOT
tryptophan synthase subunit alpha
L3_105_000M1_scaffold_60_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14986..16497
DNA (1512bp) protein (504aa)
Polar amino acid transport system substrate-binding protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCS7_9CLOT
Polar amino acid transport system substrate-binding protein {ECO:0000313|EMBL:CDC40731.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
polar amino acid transport system substrate-binding protein
L3_105_000M1_scaffold_60_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16512..17276
DNA (765bp) protein (255aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY50_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDC40730.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC transporter-like protein
L3_105_000M1_scaffold_60_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17480..18490
DNA (1011bp) protein (337aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Clostridium sp. CAG:352 RepID=R6R688_9CLOT
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDC40729.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC-type uncharacterized transport system, periplasmic component
L3_105_000M1_scaffold_60_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18517..19479
DNA (963bp) protein (321aa)
ABC-type uncharacterized transport system permease component n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVQ4_9CLOT
ABC-type uncharacterized transport system permease component {ECO:0000313|EMBL:CDC40728.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC-type uncharacterized transport system, permease component
L3_105_000M1_scaffold_60_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19483..20280
DNA (798bp) protein (266aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Clostridium sp. CAG:352 RepID=R6S262_9CLOT
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CDC40727.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC-type uncharacterized transport system, ATPase component
L3_105_000M1_scaffold_60_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20359..21258)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40726.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
HTH-type transcriptional regulator
L3_105_000M1_scaffold_60_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21824..23230
DNA (1407bp) protein (469aa)
Transporter n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY45_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
neurotransmitter:Na+ symporter, NSS family
L3_105_000M1_scaffold_60_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23260..23961
DNA (702bp) protein (234aa)
Branched-chain amino acid transporter n=1 Tax=Clostridium sp. CAG:352 RepID=R6R684_9CLOT
Branched-chain amino acid transporter {ECO:0000313|EMBL:CDC40724.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
azlC; branched-chain amino acid transport protein AzlC
L3_105_000M1_scaffold_60_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23958..24275
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40723.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
azlD; branched-chain amino acid transport protein AzlD
L3_105_000M1_scaffold_60_26
unknown

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comp(24146..24400)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_105_000M1_scaffold_60_27
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24627..25556)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S258_9CLOT
L3_105_000M1_scaffold_60_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25583..26044)
DNA (462bp) protein (154aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Phosphodiesterase family protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCR6_9CLOT
phosphoesterase, MJ0936 family
L3_105_000M1_scaffold_60_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26108..26263
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40720.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_60_30
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26267..26635
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R679_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40719.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
Displaying items 1-30 of 146 in total

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