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L3_105_000M1_scaffold_63

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Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_63_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli B185 RepID=D6IE38_ECOLX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFF04894.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
L3_105_000M1_scaffold_63_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..1702)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=219 Tax=Enterobacteriaceae RepID=J7Q9V5_ECOLX
glycerate kinase
Uncharacterized protein {ECO:0000313|EMBL:CCJ45750.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_000M1_scaffold_63_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2689)
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Escherichia coli KTE119 RepID=L3UDN5_ECOLX
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AIF63616.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L3_105_000M1_scaffold_63_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2719..3489)
DNA (771bp) protein (257aa)
garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
5-keto-4-deoxy-D-glucarate aldolase n=804 Tax=Enterobacteriaceae RepID=GARL_ECO24
L3_105_000M1_scaffold_63_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3505..4839)
DNA (1335bp) protein (445aa)
Probable galactarate transporter n=660 Tax=Enterobacteriaceae RepID=GARP_ECO57
galactarate transporter
D-galactonate transporter family protein {ECO:0000313|EMBL:EHW13097.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_105_000M1_scaffold_63_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5214..6785
DNA (1572bp) protein (524aa)
garD; (D)-galactarate dehydrogenase (EC:4.2.1.42)
Galactarate dehydratase n=248 Tax=Enterobacteriaceae RepID=A7ZS22_ECO24
Galactarate dehydratase {ECO:0000313|EMBL:EGU97888.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_105_000M1_scaffold_63_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6934..7269
DNA (336bp) protein (112aa)
Antitoxin PrlF n=560 Tax=Enterobacteriaceae RepID=PRLF_ECOLI
HtrA suppressor protein
HtrA suppressor protein {ECO:0000313|EMBL:EGW87699.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_105_000M1_scaffold_63_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7269..7733
DNA (465bp) protein (155aa)
Uncharacterized protein n=181 Tax=Enterobacteriaceae RepID=A7ZS24_ECO24
yhaV; hypothetical protein
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFK74322.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_105_000M1_scaffold_63_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7788..8597)
DNA (810bp) protein (270aa)
Putative aga operon transcriptional repressor n=1001 Tax=Enterobacteriaceae RepID=AGAR_ECO57
agaR; DNA-binding transcriptional regulator AgaR
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KDU32643.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_105_000M1_scaffold_63_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8846..10126
DNA (1281bp) protein (427aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=151 Tax=Escherichia RepID=KBAZ_ECOLX
kbaZ; tagatose 6-phosphate aldolase 1, kbaZ subunit
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L3_105_000M1_scaffold_63_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10149..10622
DNA (474bp) protein (158aa)
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS
agaV; acetylgalactosamine-specific PTS system enzyme IIB component
Putative uncharacterized protein {ECO:0000313|EMBL:EFE61987.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_105_000M1_scaffold_63_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10633..11412
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:KDX47003.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
L3_105_000M1_scaffold_63_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11402..12280
DNA (879bp) protein (293aa)
N-acetylgalactosamine permease IID component n=5 Tax=Escherichia coli RepID=G2AL05_ECOLX
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:EZA31915.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
PTS system N-acetylgalactosamine-specific transporter subunit IID
L3_105_000M1_scaffold_63_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12298..12732
DNA (435bp) protein (145aa)
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
agaF; PTS system mannose/sorbose-specific transporter subunit IIA
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_105_000M1_scaffold_63_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12729..13862
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
N-acetylglucosamine-6-phosphate deacetylase n=80 Tax=Escherichia coli RepID=B6I1L0_ECOSE
N-acetylgalactosamine-6-phosphate deacetylase
L3_105_000M1_scaffold_63_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14213..15367
DNA (1155bp) protein (385aa)
Sugar isomerase domain protein AgaS n=19 Tax=Escherichia coli RepID=H5FJR7_ECOLX
Aldose isomerase {ECO:0000313|EMBL:AIZ88786.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
AgaS family sugar isomerase
L3_105_000M1_scaffold_63_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15380..16240
DNA (861bp) protein (287aa)
kbaY; tagatose-bisphosphate aldolase (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1141 Tax=Enterobacteriaceae RepID=KBAY_ECO24
L3_105_000M1_scaffold_63_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16407..16883
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB subunit n=131 Tax=Enterobacteriaceae RepID=B1IRH8_ECOLC
agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EOU88213.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_105_000M1_scaffold_63_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16922..17725
DNA (804bp) protein (268aa)
N-acetylgalactosamine permease IIC component 1 n=625 Tax=Enterobacteriaceae RepID=PTPC1_ECOLI
PTS system N-acetylgalactosamine-specific transporter subunit IIC
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:EHP65754.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_105_000M1_scaffold_63_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17715..18506
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
N-acetylgalactosamine permease IID component {ECO:0000313|EMBL:EFZ59232.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_105_000M1_scaffold_63_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18561..19262
DNA (702bp) protein (234aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
Galactosamine-6-phosphate isomerase n=181 Tax=Enterobacteriaceae RepID=E0J2V1_ECOLW
agaI; galactosamine-6-phosphate isomerase
L3_105_000M1_scaffold_63_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19662..20246
DNA (585bp) protein (195aa)
Fimbrial protein n=276 Tax=Enterobacteriaceae RepID=A7ZS38_ECO24
yraH; fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:EGI44611.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_105_000M1_scaffold_63_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20326..21021
DNA (696bp) protein (232aa)
Gram-negative pili assembly chaperone protein n=274 Tax=Enterobacteriaceae RepID=A7ZS39_ECO24
yraI; periplasmic pilin chaperone
Gram-negative pili assembly chaperone, N-terminal domain protein {ECO:0000313|EMBL:EHW13117.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_105_000M1_scaffold_63_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21051..23567
DNA (2517bp) protein (839aa)
Fimbrial usher family protein n=49 Tax=Escherichia coli RepID=A7ZS40_ECO24
Membrane protein {ECO:0000313|EMBL:EZD31046.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
fimbrial usher family protein
L3_105_000M1_scaffold_63_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23578..24669
DNA (1092bp) protein (364aa)
Uncharacterized protein n=19 Tax=Escherichia coli RepID=I2SWC9_ECOLX
putative fimbrial protein
Uncharacterized protein {ECO:0000313|EMBL:EIH25100.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_105_000M1_scaffold_63_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24712..25572)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Ribosomal RNA small subunit methyltransferase I domain protein n=3 Tax=Escherichia coli RepID=M8WD35_ECOLX
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L3_105_000M1_scaffold_63_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25636..27672
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=140 Tax=Escherichia coli RepID=A7ZS43_ECO24
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
LppC family lipoprotein
L3_105_000M1_scaffold_63_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27630..28025
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=22 Tax=Escherichia coli RepID=E0J2U4_ECOLW
hypothetical protein
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
L3_105_000M1_scaffold_63_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28045..28635
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24
putative phosphoheptose isomerase
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_105_000M1_scaffold_63_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28645..29220
DNA (576bp) protein (192aa)
Uncharacterized protein YraP n=1098 Tax=Enterobacteriaceae RepID=YRAP_ECO57
yraP; outer membrane lipoprotein
BON domain protein {ECO:0000313|EMBL:KEJ44649.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Displaying items 1-30 of 143 in total

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