ggKbase home page

L3_105_000M1_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_92_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..659)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEF5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95189.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_105_000M1_scaffold_92_2
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(717..1058)
DNA (342bp) protein (114aa)
DNA binding domain, excisionase family n=2 Tax=Bacteroides RepID=D1K7S9_9BACE
DNA binding domain, excisionase family
DNA-binding protein {ECO:0000313|EMBL:KGN90946.1}; TaxID=393921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis.;"
L3_105_000M1_scaffold_92_3
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1055..1348)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K2F4_9BACE
CTP synthase
Uncharacterized protein {ECO:0000313|EMBL:EEZ22008.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L3_105_000M1_scaffold_92_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1558..1917
DNA (360bp) protein (120aa)
DNA binding domain, excisionase family n=3 Tax=Bacteroidales RepID=D1W4E8_9BACT
DNA-binding protein
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EYA17931.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_105_000M1_scaffold_92_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1921..2271
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X4A5_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK68399.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_105_000M1_scaffold_92_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2292..3881
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4A6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52726.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_92_7
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4832..5740)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XAM2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ86171.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_105_000M1_scaffold_92_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5746..7203)
DNA (1458bp) protein (486aa)
Alginate O-acetylation protein, putative alginate o-acetyltransferase n=3 Tax=Bacteroidales RepID=A6LC28_PARD8
alginate O-acetylation protein alginate o-acetyltransferase
Putative alginate O-acetyltransferase AlgI {ECO:0000313|EMBL:EEY84411.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_105_000M1_scaffold_92_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7324..7791
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=E1YUR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23446.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_105_000M1_scaffold_92_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7945..8763)
DNA (819bp) protein (273aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=7 Tax=Parabacteroides RepID=A6LC30_PARD8
cyclophilin type peptidyl-prolyl cis-trans isomerase
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein {ECO:0000313|EMBL:KDS57731.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_92_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8803..10647)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BGJ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27193.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
collagenase
L3_105_000M1_scaffold_92_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10648..11580)
DNA (933bp) protein (311aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Homoserine O-succinyltransferase n=8 Tax=Bacteroidales RepID=META_PARD8
L3_105_000M1_scaffold_92_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11630..12865)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XAL6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51293.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_92_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13015..13926)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YQH4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79242.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_92_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13955..15358)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WS19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62183.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
algI; alginate O-acetylation protein
L3_105_000M1_scaffold_92_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16017..16316
DNA (300bp) protein (100aa)
Nucleotidyltransferase domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TI07_9BACE
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEY82761.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Predicted nucleotidyltransferases
L3_105_000M1_scaffold_92_17
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16309..16662
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZA42_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY34314.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_105_000M1_scaffold_92_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16850..21334)
DNA (4485bp) protein (1495aa)
RND transporter, HAE1 family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAZ0_9BACE
RND transporter, HAE1 family {ECO:0000313|EMBL:EEY84403.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
aminoglycoside efflux pump
L3_105_000M1_scaffold_92_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21331..22497)
DNA (1167bp) protein (389aa)
Acriflavine resistance protein A n=2 Tax=Bacteroidales RepID=D7IT32_9BACE
Acriflavine resistance protein A {ECO:0000313|EMBL:EFI07982.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
acriflavine resistance protein A
L3_105_000M1_scaffold_92_20
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22773..23447)
DNA (675bp) protein (225aa)
Ribosomal large subunit pseudouridine synthase D n=3 Tax=Parabacteroides RepID=A6LC37_PARD8
ribosomal large subunit pseudouridine synthase D
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CDB50717.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_000M1_scaffold_92_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23449..24195)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KDS49369.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KDS49369.1};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
3-oxoacyl-[acyl-carrier protein] reductase n=7 Tax=Bacteroidales RepID=A6LC38_PARD8
3-oxoacyl-ACP reductase
L3_105_000M1_scaffold_92_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24216..25160)
DNA (945bp) protein (315aa)
Beta-ketoacyl-acyl-carrier-protein synthase III n=5 Tax=Bacteroidales RepID=D0TAY5_9BACE
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000313|EMBL:EFI07979.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
3-oxoacyl-ACP synthase
L3_105_000M1_scaffold_92_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25178..25771)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=8 Tax=Bacteroidales RepID=D0TAY4_9BACE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI07978.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transcriptional regulator
L3_105_000M1_scaffold_92_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26189..28048)
DNA (1860bp) protein (620aa)
Beta-lactamase n=1 Tax=Parabacteroides sp. D13 RepID=C7XAK7_9PORP
Beta-lactamase {ECO:0000313|EMBL:EEU51284.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
beta-lactamase class C 6-aminohexanoate-dimer hydrolase
L3_105_000M1_scaffold_92_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28076..28489)
DNA (414bp) protein (138aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=8 Tax=Bacteroidales RepID=A6LC42_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61965.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_92_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28500..29066)
DNA (567bp) protein (189aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Xanthine phosphoribosyltransferase n=9 Tax=Bacteroidales RepID=XPT_PARD8
L3_105_000M1_scaffold_92_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29073..30398)
DNA (1326bp) protein (442aa)
Xanthine permease n=1 Tax=Parabacteroides sp. D25 RepID=K6ATT2_9PORP
Xanthine permease {ECO:0000313|EMBL:EKN27181.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
purine permease
L3_105_000M1_scaffold_92_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30407..32293)
DNA (1887bp) protein (629aa)
Ser/Thr phosphatase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAX9_9BACE
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEY84392.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_92_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32308..33330)
DNA (1023bp) protein (341aa)
Threonine aldolase, low-specificity n=4 Tax=Bacteroidales RepID=D7IT22_9BACE
Threonine aldolase, low-specificity {ECO:0000313|EMBL:EFI07972.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L-threonine aldolase
L3_105_000M1_scaffold_92_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33407..33676)
DNA (270bp) protein (90aa)
RelE family toxin-antitoxin system toxin component n=3 Tax=Bacteroidales RepID=D7IT21_9BACE
Plasmid stabilization system protein, RelE/ParE family {ECO:0000313|EMBL:EFK61960.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
plasmid stabilization system
Displaying items 1-30 of 111 in total

View Taxonomy