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L3_105_000M1_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_119_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

496..2556
DNA (2061bp) protein (687aa)
F5/8 type C domain protein n=5 Tax=Parabacteroides RepID=C7XFA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29761.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycoside hydrolase
L3_105_000M1_scaffold_119_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2642..5473)
DNA (2832bp) protein (944aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XFA1_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEU49273.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
signal transduction histidine kinase
L3_105_000M1_scaffold_119_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5745..6719)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A5A2_9PORP
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:KDS71116.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_119_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6737..8377)
DNA (1641bp) protein (547aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6APU2_9PORP
carboxylesterase type B
L3_105_000M1_scaffold_119_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8423..10261)
DNA (1839bp) protein (613aa)
Glycoside hydrolase family 13, candidate alpha-glycosidase n=6 Tax=Bacteroidales RepID=A6LFJ3_PARD8
glycoside hydrolase family protein
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEU49276.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_000M1_scaffold_119_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10330..11715)
DNA (1386bp) protein (462aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFJ4_PARD8
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:ABR44458.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11728..14796)
DNA (3069bp) protein (1023aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFJ5_PARD8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR44459.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14815..16656)
DNA (1842bp) protein (614aa)
Alpha amylase, catalytic domain protein n=5 Tax=Bacteroidales RepID=C7XFA7_9PORP
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFK60304.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
glycoside hydrolase family protein
L3_105_000M1_scaffold_119_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16665..18008)
DNA (1344bp) protein (448aa)
Putative NADH-dependent dyhydrogenase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFJ7_PARD8
NADH-dependent dyhydrogenase
Putative NADH-dependent dyhydrogenase {ECO:0000313|EMBL:ABR44461.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18040..18807)
DNA (768bp) protein (256aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XFA9_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60306.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_119_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19045..23019
DNA (3975bp) protein (1325aa)
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IX84_9BACE
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) {ECO:0000313|EMBL:EFI06982.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component system sensor histidine kinase/response regulator
L3_105_000M1_scaffold_119_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23024..23866)
DNA (843bp) protein (281aa)
LytTr DNA-binding domain protein n=5 Tax=Bacteroidales RepID=D7IX83_9BACE
LytTr DNA-binding domain protein {ECO:0000313|EMBL:KDS71108.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_119_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24046..25191
DNA (1146bp) protein (382aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1Z134_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29749.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000M1_scaffold_119_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25452..26420)
DNA (969bp) protein (323aa)
Peptide chain release factor 2 n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A594_9PORP
RF-1 domain protein {ECO:0000313|EMBL:KDS71106.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
peptide chain release factor RF-2
L3_105_000M1_scaffold_119_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26640..28445)
DNA (1806bp) protein (602aa)
AMP-binding enzyme n=1 Tax=Parabacteroides sp. D13 RepID=C7XFB7_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:EEU49289.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
long-chain-fatty-acid-CoA ligase
L3_105_000M1_scaffold_119_16
unknown

Not on your lists

comp(28518..28610)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_105_000M1_scaffold_119_17
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28633..28959
DNA (327bp) protein (109aa)
Transcriptional regulator, PadR family n=7 Tax=Bacteroidales RepID=D0TJR8_9BACE
Putative PadR-family transcriptional regulatory protein {ECO:0000313|EMBL:CDB50104.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_000M1_scaffold_119_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28972..30084
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AT21_9PORP
PspC domain protein {ECO:0000313|EMBL:KDS71103.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_119_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30326..30721)
DNA (396bp) protein (132aa)
Histidine triad (HIT) family protein n=9 Tax=Bacteroidales RepID=A6LFK6_PARD8
histidine triad (HIT) family protein
Histidine triad (HIT) family protein {ECO:0000313|EMBL:ABR44470.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30736..31206)
DNA (471bp) protein (157aa)
Transcription elongation factor GreA n=9 Tax=Bacteroidales RepID=A6LFK7_PARD8
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_000M1_scaffold_119_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31404..32561)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A5L2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50108.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_000M1_scaffold_119_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32766..35006
DNA (2241bp) protein (747aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJR3_9BACE
polynucleotide phosphorylase
L3_105_000M1_scaffold_119_23
unknown

Not on your lists

comp(35185..35307)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_105_000M1_scaffold_119_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35936..36397)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LFL1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44475.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36499..37218)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APS3_9PORP
hypothetical protein
TPR-repeat-containing protein {ECO:0000313|EMBL:ABR44476.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37267..38238)
DNA (972bp) protein (324aa)
TPR-repeat-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IX70_9BACE
TPR-repeat-containing protein {ECO:0000313|EMBL:EFI06968.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000M1_scaffold_119_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38300..39682
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LFL3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44477.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_119_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39774..41402)
DNA (1629bp) protein (543aa)
Fumarate hydratase class I, anaerobic n=9 Tax=Bacteroidales RepID=A6LFL4_PARD8
fumarate hydratase class I, anaerobic
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EKN25598.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_105_000M1_scaffold_119_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41528..43777
DNA (2250bp) protein (750aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IX67_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06965.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
lysyl endopeptidase
L3_105_000M1_scaffold_119_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44043..45734
DNA (1692bp) protein (564aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroidales RepID=D0TJQ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN29718.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
Displaying items 1-30 of 111 in total

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