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L3_105_000M1_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_123_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(105..1700)
DNA (1596bp) protein (532aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEY0_PARD8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR44244.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_123_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1728..4844)
DNA (3117bp) protein (1039aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides sp. D13 RepID=C7XDF0_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU49903.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_123_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5390..7873)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ASS3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26645.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
alanyl dipeptidyl peptidase
L3_105_000M1_scaffold_123_4
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7948..10269)
DNA (2322bp) protein (774aa)
Glycoside hydrolase family 20 n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JD53_9PORP
Glycoside hydrolase family 20 {ECO:0000313|EMBL:CDB48142.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
beta-N-acetylhexosaminidase
L3_105_000M1_scaffold_123_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10565..11464)
DNA (900bp) protein (300aa)
Metallo-beta-lactamase domain protein n=4 Tax=Bacteroidales RepID=D0TI95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN26647.1}; Flags: Fragment;; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
metal-dependent hydrolase
L3_105_000M1_scaffold_123_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11790..14852
DNA (3063bp) protein (1021aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Parabacteroides RepID=K5ZSD1_9PORP
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR44239.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
hypothetical protein
L3_105_000M1_scaffold_123_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14868..16574
DNA (1707bp) protein (569aa)
SusD family protein n=5 Tax=Bacteroidales RepID=D0TI93_9BACE
hypothetical protein
SusD family protein {ECO:0000313|EMBL:KDS59547.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_123_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16926..18494
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV45_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07773.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000M1_scaffold_123_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18510..20285
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49896.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_123_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20282..21751
DNA (1470bp) protein (490aa)
Cytochrome c binding protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV47_9BACE
Cytochrome c binding protein {ECO:0000313|EMBL:EFI07775.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000M1_scaffold_123_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21815..22741
DNA (927bp) protein (309aa)
UDP-N-acetylmuramate-alanine ligase n=4 Tax=Bacteroidales RepID=A6LEW9_PARD8
UDP-N-acetylmuramate-alanine ligase
Mur ligase middle domain protein {ECO:0000313|EMBL:KDS59511.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_123_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22738..23286
DNA (549bp) protein (183aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS59499.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_123_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23301..24164
DNA (864bp) protein (288aa)
dTDP-4-dehydrorhamnose reductase n=4 Tax=Bacteroidales RepID=D0TI86_9BACE
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKN26223.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_105_000M1_scaffold_123_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24194..25774
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=3 Tax=Bacteroidales RepID=D0TI85_9BACE
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
peptide chain release factor 3
L3_105_000M1_scaffold_123_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25776..26783
DNA (1008bp) protein (336aa)
ApbE family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDD7_9PORP
ApbE family protein {ECO:0000313|EMBL:EEU49890.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
thiamine biosynthesis lipoprotein ApbE
L3_105_000M1_scaffold_123_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26915..27607)
DNA (693bp) protein (231aa)
HAD superfamily (Subfamily IA) hydrolase n=3 Tax=Bacteroidales RepID=D7IV53_9BACE
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFK61589.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
HAD superfamily hydrolase
L3_105_000M1_scaffold_123_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27607..28479)
DNA (873bp) protein (291aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW3_PARD8
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:KDS59530.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_123_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28499..29203)
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Ribosomal RNA small subunit methyltransferase I n=6 Tax=Bacteroidales RepID=A6LEW2_PARD8
methyltransferase
L3_105_000M1_scaffold_123_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29213..29908)
DNA (696bp) protein (232aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LEW1_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07784.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_000M1_scaffold_123_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30018..31433)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YX93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61585.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
exonuclease V subunit alpha
L3_105_000M1_scaffold_123_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31527..32162
DNA (636bp) protein (212aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LEV9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS49589.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_000M1_scaffold_123_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32175..33002
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A4Q8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS59528.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_123_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32993..33550
DNA (558bp) protein (186aa)
RsmD family RNA methyltransferase n=2 Tax=Parabacteroides RepID=K6BDU3_9PORP
methyltransferase
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EKN26233.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_105_000M1_scaffold_123_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33522..34958)
DNA (1437bp) protein (479aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Cardiolipin synthase n=6 Tax=Bacteroidales RepID=D7IV61_9BACE
cardiolipin synthetase
L3_105_000M1_scaffold_123_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35556..36806
DNA (1251bp) protein (417aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LEV5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44219.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_123_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36818..39148
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TI73_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82827.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_123_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39209..39940
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEV3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44217.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_123_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40045..41019)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YWK3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18687.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hemolysin A
L3_105_000M1_scaffold_123_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41032..41856)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ASI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18688.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_105_000M1_scaffold_123_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42333..43250
DNA (918bp) protein (306aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Parabacteroides distasonis RepID=RSMH_PARD8
mraW; S-adenosyl-methyltransferase MraW
Displaying items 1-30 of 82 in total

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