ggKbase home page

L3_105_000M1_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_131_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(577..2661)
DNA (2085bp) protein (695aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAU5_EUBR3
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ACR75600.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2857..4509
DNA (1653bp) protein (551aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAU4_EUBR3
Uncharacterized protein {ECO:0000313|EMBL:ACR75599.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein
L3_105_000M1_scaffold_131_3
unknown

Not on your lists

4534..4626
DNA (93bp) protein (31aa)

This feature has no annotations

L3_105_000M1_scaffold_131_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4626..5000
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E549_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90539.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_131_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5076..5654
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNK2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94671.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5797..6003)
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TR04_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75597.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6021..7208)
DNA (1188bp) protein (396aa)
Sodium--glutamate symport carrier (GltS) n=2 Tax=Eubacterium RepID=D6E537_9FIRM
sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:ACR75596.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7300..8226)
DNA (927bp) protein (309aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNJ7_9FIRM
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:CBK94666.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8398..9267
DNA (870bp) protein (290aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK90525.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK90525.1};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Undecaprenyl-diphosphatase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E535_9FIRM
L3_105_000M1_scaffold_131_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9308..9811
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=4 Tax=Eubacterium RepID=C4ZAT8_EUBR3
Transcription elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9905..11122
DNA (1218bp) protein (406aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E533_9FIRM
DNA-binding transcriptional activator of the SARP family
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:CBK90523.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_131_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11119..11628
DNA (510bp) protein (170aa)
signal peptidase I, archaeal type (EC:3.4.21.89)
Signal peptidase I, archaeal type {ECO:0000313|EMBL:CBK90522.1}; EC=3.4.21.89 {ECO:0000313|EMBL:CBK90522.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Signal peptidase I, archaeal type n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E532_9FIRM
L3_105_000M1_scaffold_131_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11621..12394
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6UV83_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75590.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12416..12868
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74608.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_105_000M1_scaffold_131_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12882..13658
DNA (777bp) protein (259aa)
Ketoacyl reductase, putative n=3 Tax=Eubacterium RepID=C4ZAT3_EUBR3
Short-chain dehydrogenases of various substrate specificities
Ketoacyl reductase, putative {ECO:0000313|EMBL:ACR75588.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13717..15573
DNA (1857bp) protein (619aa)
Pullulanase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAT2_EUBR3
Pullulanase {ECO:0000313|EMBL:ACR75587.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
pullulanase
L3_105_000M1_scaffold_131_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15570..16841)
DNA (1272bp) protein (424aa)
Chloride channel protein EriC n=2 Tax=Eubacterium rectale RepID=D4JNI8_9FIRM
Chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:CBK94657.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17042..18616
DNA (1575bp) protein (525aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Eubacterium RepID=D4JNI7_9FIRM
L3_105_000M1_scaffold_131_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18756..20255
DNA (1500bp) protein (500aa)
Stage IV sporulation protein A n=2 Tax=Eubacterium RepID=D4JNI6_9FIRM
stage IV sporulation protein A
Stage IV sporulation protein A {ECO:0000313|EMBL:CBK94655.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20419..21177
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNI5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94654.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_131_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21234..21362
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TXR8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75581.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21375..24035
DNA (2661bp) protein (887aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Alanine--tRNA ligase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNI3_9FIRM
L3_105_000M1_scaffold_131_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24189..25460
DNA (1272bp) protein (424aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMJ1_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC74623.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_105_000M1_scaffold_131_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25474..27363
DNA (1890bp) protein (630aa)
Methyl-accepting chemotaxis protein n=2 Tax=Eubacterium rectale RepID=D4JNI1_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBK90510.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_131_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27855..28964
DNA (1110bp) protein (370aa)
Putative cobalamin synthesis protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAS1_EUBR3
putative cobalamin synthesis protein
Putative cobalamin synthesis protein {ECO:0000313|EMBL:ACR75576.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29010..29954
DNA (945bp) protein (315aa)
CobW/HypB/UreG nucleotide-binding domain n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3H7_9FIRM
CobW/HypB/UreG nucleotide-binding domain {ECO:0000313|EMBL:CDC74631.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
CobW/HypB/UreG, nucleotide-binding domain.
L3_105_000M1_scaffold_131_27
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30194..31084
DNA (891bp) protein (297aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Ferredoxin--NADP(+) reductase subunit alpha n=4 Tax=Eubacterium RepID=C4ZAR9_EUBR3
Ferredoxin--NADP(+) reductase subunit alpha {ECO:0000313|EMBL:CDC74632.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_131_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31084..32475
DNA (1392bp) protein (464aa)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=3 Tax=Eubacterium RepID=D4JNH6_9FIRM
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CDC74633.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_131_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32589..33704)
DNA (1116bp) protein (372aa)
Probable histidinol-phosphate aminotransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAR6_EUBR3
putative histidinol-phosphate aminotransferase
Probable histidinol-phosphate aminotransferase {ECO:0000313|EMBL:ACR75571.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_131_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33791..37336
DNA (3546bp) protein (1182aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAR5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75570.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying items 1-30 of 108 in total

View Taxonomy