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L3_105_000M1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_175_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_105_000M1_scaffold_175_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

217..720
DNA (504bp) protein (168aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6L9F7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61351.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_175_3
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

725..1393
DNA (669bp) protein (223aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JET3_9PORP
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDB48677.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_000M1_scaffold_175_4
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1423..2400
DNA (978bp) protein (326aa)
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EFK61353.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EFK61353.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Dihydroorotate dehydrogenase family protein n=9 Tax=Bacteroidales RepID=A6L9F5_PARD8
L3_105_000M1_scaffold_175_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2544..2909
DNA (366bp) protein (122aa)
Transcriptional regulator, MarR family n=9 Tax=Bacteroidales RepID=C7XA94_9PORP
transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU51171.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_000M1_scaffold_175_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2977..5445
DNA (2469bp) protein (823aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K5ZK78_9PORP
pyridine nucleotide-disulfide oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EKN27277.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_000M1_scaffold_175_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5515..5772)
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6L9F2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42316.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_175_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5788..7062)
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000313|EMBL:KDS65442.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KDS65442.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Seryl-tRNA synthetase n=2 Tax=Bacteroidales RepID=A6L9F1_PARD8
L3_105_000M1_scaffold_175_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7110..7649)
DNA (540bp) protein (180aa)
NlpC/P60 family protein n=7 Tax=Bacteroidales RepID=C7XA89_9PORP
lipoprotein
NlpC/P60 family protein {ECO:0000313|EMBL:KDS65448.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_175_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7779..8489)
DNA (711bp) protein (237aa)
Two-component system response regulator n=2 Tax=Parabacteroides RepID=A6L9E9_PARD8
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:ABR42313.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_175_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8486..9508)
DNA (1023bp) protein (341aa)
Histidine kinase superfamily n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWH9_9BACE
Histidine kinase family protein {ECO:0000313|EMBL:KDS65451.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
two-component system sensor histidine kinase
L3_105_000M1_scaffold_175_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9608..11602)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B5L7_9PORP
Putative alpha-glucosidase {ECO:0000313|EMBL:KDS65439.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glycoside hydrolase
L3_105_000M1_scaffold_175_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11685..13424
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY84292.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
acetylhydrolase
L3_105_000M1_scaffold_175_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13437..13973)
DNA (537bp) protein (179aa)
Competence-damage inducible protein n=6 Tax=Bacteroidales RepID=A6L9E5_PARD8
competence-damage inducible protein
Competence-damage inducible protein {ECO:0000313|EMBL:ABR42309.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_175_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14036..15055)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Parabacteroides sp. D13 RepID=C7XA83_9PORP
DNA-binding/iron metalloprotein/AP endonuclease
L3_105_000M1_scaffold_175_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15195..19658
DNA (4464bp) protein (1488aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YY09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27268.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000M1_scaffold_175_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19615..20547)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM5_9BACE
dihydrouridine synthase
L3_105_000M1_scaffold_175_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20549..21214)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Octanoyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM4_9BACE
lipoate-protein ligase B
L3_105_000M1_scaffold_175_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21160..21960)
DNA (801bp) protein (267aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM3_9BACE
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L3_105_000M1_scaffold_175_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22101..23759
DNA (1659bp) protein (553aa)
AMP-binding enzyme n=9 Tax=Bacteroidales RepID=C7XA78_9PORP
long-chain-fatty-acid--CoA ligase
AMP-binding enzyme family protein {ECO:0000313|EMBL:EFI07287.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_000M1_scaffold_175_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23810..24319)
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=8 Tax=Bacteroidales RepID=A6L9D8_PARD8
RNA polymerase ECF-type sigma factor
Sigma-70 region 2 {ECO:0000313|EMBL:EFK61369.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_175_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24585..25964
DNA (1380bp) protein (460aa)
Putative endopeptidase Clp n=1 Tax=Parabacteroides sp. D13 RepID=C7XA76_9PORP
Putative endopeptidase Clp {ECO:0000313|EMBL:EEU51153.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
membrane-bound serine protease
L3_105_000M1_scaffold_175_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25971..26606)
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L9D6_PARD8
hypothetical protein
Divergent AAA domain protein {ECO:0000313|EMBL:KDS65452.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_175_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26677..28947
DNA (2271bp) protein (757aa)
Sodium/hydrogen exchanger family protein n=2 Tax=Bacteroidales RepID=D7IWG6_9BACE
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEY84281.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Na+/H+ antiporter
L3_105_000M1_scaffold_175_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28962..29717
DNA (756bp) protein (252aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWG5_9BACE
L3_105_000M1_scaffold_175_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29734..31458)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6L9D3_PARD8
Putative membrane protein {ECO:0000313|EMBL:KDS65441.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_175_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31707..33608)
DNA (1902bp) protein (634aa)
Membrane protein insertase YidC n=2 Tax=Parabacteroides distasonis RepID=YIDC_PARD8
inner membrane protein translocase component YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_105_000M1_scaffold_175_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33619..35226)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=6 Tax=Bacteroidales RepID=C7XA70_9PORP
L3_105_000M1_scaffold_175_29
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35647..37188
DNA (1542bp) protein (514aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YY23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61378.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_000M1_scaffold_175_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37290..37706
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWG0_9BACE
Sigma-E factor negative regulatory protein RseC {ECO:0000313|EMBL:KEJ86008.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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