ggKbase home page

L3_105_000M1_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_186_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
Probable transposase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP8_EUBR3
putative transposase
Probable transposase {ECO:0000313|EMBL:ACR74845.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(437..949)
DNA (513bp) protein (171aa)
Probable transposase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP8_EUBR3
putative transposase
Probable transposase {ECO:0000313|EMBL:ACR74845.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(900..1550)
DNA (651bp) protein (217aa)
DNA invertase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP7_EUBR3
DNA invertase
DNA invertase {ECO:0000313|EMBL:ACR74844.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1774..5832)
DNA (4059bp) protein (1353aa)
Periplasmic alpha-amylase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP6_EUBR3
Periplasmic alpha-amylase {ECO:0000313|EMBL:ACR74843.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
periplasmic alpha-amylase precursor
L3_105_000M1_scaffold_186_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6229..7278)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYI8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91126.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_186_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7275..7613)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP4_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74841.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7628..8155)
DNA (528bp) protein (176aa)
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYI5_9FIRM
L3_105_000M1_scaffold_186_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8152..9015)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74839.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9159..10022)
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYI3_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK91121.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_186_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10029..10946)
DNA (918bp) protein (306aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium RepID=D6DYI2_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC71331.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_186_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11109..12503)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGN9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74836.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12574..13584)
DNA (1011bp) protein (337aa)
Transcriptional regulator (LacI family) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGE6_9FIRM
Transcriptional regulator (LacI family) {ECO:0000313|EMBL:CDC71320.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
transcriptional regulator, LacI family
L3_105_000M1_scaffold_186_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13968..16421
DNA (2454bp) protein (818aa)
cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose phosphorylase n=2 Tax=Eubacterium rectale RepID=D6DYH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ACR74834.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16560..16886)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TGE1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91116.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_186_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17006..17482)
DNA (477bp) protein (159aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TTN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC71311.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_186_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17475..18104)
DNA (630bp) protein (210aa)
SpoVAA n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGN3_EUBR3
SpoVAA
SpoVAA {ECO:0000313|EMBL:ACR74830.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_17
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18274..19041
DNA (768bp) protein (256aa)
Uncharacterized conserved protein n=2 Tax=Eubacterium RepID=D6DYH5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC71305.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_186_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19045..19488
DNA (444bp) protein (148aa)
Uncharacterized conserved protein n=2 Tax=Eubacterium rectale RepID=D4JK06_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK93953.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_105_000M1_scaffold_186_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19499..21400)
DNA (1902bp) protein (634aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGC6_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDC71300.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_105_000M1_scaffold_186_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21360..22034)
DNA (675bp) protein (225aa)
GTP pyrophosphokinase n=3 Tax=Eubacterium RepID=C4ZGM7_EUBR3
hypothetical protein
GTP pyrophosphokinase {ECO:0000313|EMBL:ACR74824.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22499..22762)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6UKH9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC71292.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_105_000M1_scaffold_186_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22764..23555)
DNA (792bp) protein (264aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGM4_EUBR3
RNA methyltransferase, TrmH family, group 3
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACR74821.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23735..24706)
DNA (972bp) protein (324aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000313|EMBL:CBK93958.1};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
6-phosphofructokinase n=3 Tax=Eubacterium rectale RepID=C4ZGM3_EUBR3
6-phosphofructokinase
L3_105_000M1_scaffold_186_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24770..28270)
DNA (3501bp) protein (1167aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
DNA polymerase III, alpha subunit n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGM2_EUBR3
dnaE; DNA polymerase III DnaE
L3_105_000M1_scaffold_186_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28359..29516)
DNA (1158bp) protein (386aa)
Peptidoglycan endo-beta-N-acetylglucosaminidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGM1_EUBR3
peptidoglycan endo-beta-N-acetylglucosaminidase
Peptidoglycan endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:ACR74818.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29552..30334)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TCV2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74817.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_105_000M1_scaffold_186_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30339..32807)
DNA (2469bp) protein (823aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587, ECO:0000313|EMBL:CBK91104.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=2 Tax=Eubacterium RepID=D6DYG6_9FIRM
L3_105_000M1_scaffold_186_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32866..36033)
DNA (3168bp) protein (1056aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Isoleucine--tRNA ligase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGL8_EUBR3
ileS; isoleucyl-tRNA synthetase
L3_105_000M1_scaffold_186_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36500..37408)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYG4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91102.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_186_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37567..39066)
DNA (1500bp) protein (500aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGL6_EUBR3
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ACR74813.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying items 1-30 of 83 in total

View Taxonomy