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L3_105_000M1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_222_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00048.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_105_000M1_scaffold_222_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(989..2104)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00474.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_105_000M1_scaffold_222_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2555..2890
DNA (336bp) protein (112aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YQF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53599.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator
L3_105_000M1_scaffold_222_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3018..3575
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB77084.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_105_000M1_scaffold_222_5
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3744..4079
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VUY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72620.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Predicted transcriptional regulator with C-terminal CBS domains
L3_105_000M1_scaffold_222_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4228..4482)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0PFK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21707.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4501..6312)
DNA (1812bp) protein (604aa)
TraG/TraD family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21708.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6410..6577
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PFK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI80196.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000M1_scaffold_222_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6600..8051)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09768.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_105_000M1_scaffold_222_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8211..10355)
DNA (2145bp) protein (715aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTF0_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EHM43908.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_222_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10377..10814)
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21711.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11222..12265)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJJ68649.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L3_105_000M1_scaffold_222_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12266..12526)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43914.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_222_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12538..13242)
DNA (705bp) protein (235aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21715.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000M1_scaffold_222_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13279..14364)
DNA (1086bp) protein (362aa)
Peptidase, M23 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFI2_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EDS09758.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative metalloendopeptidase
L3_105_000M1_scaffold_222_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14377..16227)
DNA (1851bp) protein (617aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CME0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21720.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16324..16920)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09753.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_105_000M1_scaffold_222_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16923..17204)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21722.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17213..17761)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43925.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_105_000M1_scaffold_222_20
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17786..19465)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LF77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS57439.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
C-5 cytosine-specific DNA methylase
L3_105_000M1_scaffold_222_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19781..20170)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43927.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_222_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20167..21075)
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0PFH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23747.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_222_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21206..21634)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PFH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43929.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_222_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21701..22042)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09468.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_105_000M1_scaffold_222_25
unknown

Not on your lists

comp(22145..22675)
DNA (531bp) protein (177aa)

This feature has no annotations

L3_105_000M1_scaffold_222_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22716..23189)
DNA (474bp) protein (158aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P769_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12372.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_105_000M1_scaffold_222_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23203..24900)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P770_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12373.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_105_000M1_scaffold_222_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24966..25523)
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P771_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI80160.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000M1_scaffold_222_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25717..26262)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43937.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_222_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26259..26657)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P773_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23737.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 100 in total

View Taxonomy