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L3_105_000M1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_223_1
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1250..2425
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z625_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY31604.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_105_000M1_scaffold_223_2
unknown

Not on your lists

2891..3211
DNA (321bp) protein (107aa)

This feature has no annotations

L3_105_000M1_scaffold_223_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3234..4415
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I4W6_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EYA36937.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
hypothetical protein
L3_105_000M1_scaffold_223_4
unknown

Not on your lists

4417..4935
DNA (519bp) protein (173aa)

This feature has no annotations

L3_105_000M1_scaffold_223_5
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5686..6810
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z6Y1_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY32858.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_105_000M1_scaffold_223_6
unknown

Not on your lists

comp(7159..7257)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_105_000M1_scaffold_223_7
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7261..8283
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z6H3_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY33930.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_105_000M1_scaffold_223_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9029..10162
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AS34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49371.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_105_000M1_scaffold_223_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10589..13237)
DNA (2649bp) protein (883aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D953A7
L3_105_000M1_scaffold_223_10
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13272..14054)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003648FA0
Uncharacterized protein {ECO:0000313|EMBL:EKU87521.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
cellulase
L3_105_000M1_scaffold_223_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14239..16662
DNA (2424bp) protein (808aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Lon protease n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAA418
ATP-dependent protease La
L3_105_000M1_scaffold_223_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16662..17834
DNA (1173bp) protein (391aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
thiouridylase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FEAEE8
L3_105_000M1_scaffold_223_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18122..19519
DNA (1398bp) protein (466aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
asparaginyl-tRNA synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003694894
L3_105_000M1_scaffold_223_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19691..21115
DNA (1425bp) protein (475aa)
RNA polymerase sigma54 factor n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F7ACD2
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EHB91224.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
RNA polymerase, sigma 54 subunit, RpoN/SigL
L3_105_000M1_scaffold_223_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21215..21835
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000364FFBD
Uncharacterized protein {ECO:0000313|EMBL:EHB91225.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_223_16
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21936..23750
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037670CB
Uncharacterized protein {ECO:0000313|EMBL:CCY35295.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
beta-galactosidase
L3_105_000M1_scaffold_223_17
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(24413..27031)
DNA (2619bp) protein (873aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003602F99
Uncharacterized protein {ECO:0000313|EMBL:EDM26944.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
L3_105_000M1_scaffold_223_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27271..28905)
DNA (1635bp) protein (545aa)
ABC transporter n=1 Tax=Alistipes sp. AP11 RepID=UPI00030D0644
Uncharacterized protein {ECO:0000313|EMBL:EHB93170.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ABC-1 domain-containing protein
L3_105_000M1_scaffold_223_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28902..29219)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003174993
Uncharacterized protein {ECO:0000313|EMBL:EHB93171.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_223_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29484..30035
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA72668.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_105_000M1_scaffold_223_21
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30118..30750)
DNA (633bp) protein (211aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5WPW5_9BACT
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:CCZ97986.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_105_000M1_scaffold_223_22
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30752..32884)
DNA (2133bp) protein (711aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Alistipes sp. CAG:157 RepID=R5W5M6_9BACT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCZ97985.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
L3_105_000M1_scaffold_223_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33384..33941)
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000317B4D6
peptide deformylase
L3_105_000M1_scaffold_223_24
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33969..34865)
DNA (897bp) protein (299aa)
Diaminopimelate dehydrogenase n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PE87_9PORP
Oxidoreductase {ECO:0000313|EMBL:KIO44555.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
putative oxidoreductase
L3_105_000M1_scaffold_223_25
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34877..35377)
DNA (501bp) protein (167aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Putative Holliday junction resolvase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HBK1_9BACT
RNAse H-fold protein YqgF
L3_105_000M1_scaffold_223_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35648..36004
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EQN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94970.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_105_000M1_scaffold_223_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36206..37159
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000366B6D5
Uncharacterized protein {ECO:0000313|EMBL:EHB91240.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycoside hydrolase family protein
L3_105_000M1_scaffold_223_28
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


37189..38730
DNA (1542bp) protein (514aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetease n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ED9737
L3_105_000M1_scaffold_223_29
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38847..39317
DNA (471bp) protein (157aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
phosphopantetheine adenylyltransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D53471
L3_105_000M1_scaffold_223_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39347..40393
DNA (1047bp) protein (349aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E28FF1
Displaying items 1-30 of 86 in total

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