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L3_105_000M1_scaffold_237

Search features with annotation key words

Displaying items 31-60 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_237_31
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34793..35587)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCD5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03789.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_32
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35623..36102)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67363.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_105_000M1_scaffold_237_33
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36194..36955)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U983_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO03787.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_34
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37134..37964)
DNA (831bp) protein (277aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
punA; Purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THL4_9FIRM
L3_105_000M1_scaffold_237_35
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37979..40954)
DNA (2976bp) protein (992aa)
Binding-protein-dependent transport system putative ATPase component (EC:3.6.3.-)
Binding-protein-dependent transport system putative ATPase component {ECO:0000313|EMBL:CCO03785.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO03785.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T556_9FIRM
L3_105_000M1_scaffold_237_36
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40973..42025)
DNA (1053bp) protein (351aa)
Efflux transporter RND family MFP subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCD0_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03784.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_37
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42284..43333)
DNA (1050bp) protein (350aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1M4_9FIRM
Binding-protein-dependent transport system membrane component
Binding-protein-dependent transport system membrane component {ECO:0000313|EMBL:CCO03783.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_38
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43346..44428)
DNA (1083bp) protein (361aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U976_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC67357.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Binding-protein-dependent transport system membrane component
L3_105_000M1_scaffold_237_39
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44428..46905)
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67356.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_105_000M1_scaffold_237_40
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46932..47561)
DNA (630bp) protein (210aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T552_9FIRM
hypothetical protein predicted by Glimmer/Critica
Conserved domain protein {ECO:0000313|EMBL:CDC67355.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_105_000M1_scaffold_237_41
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47563..49143)
DNA (1581bp) protein (527aa)
Tetratricopeptide repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCC6_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDC67354.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_105_000M1_scaffold_237_42
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49215..50117)
DNA (903bp) protein (301aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1L9_9FIRM
Binding-protein-dependent transport systems inner membrane component
ABC transporter permease protein {ECO:0000313|EMBL:CDC67353.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_105_000M1_scaffold_237_43
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50136..51074)
DNA (939bp) protein (313aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U970_9FIRM
Binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCO03777.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_44
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51092..54046)
DNA (2955bp) protein (985aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THK4_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCO03776.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Extracellular solute-binding protein family 1
L3_105_000M1_scaffold_237_45
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54190..55137)
DNA (948bp) protein (316aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO03775.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO03775.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative lipoprotein ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T548_9FIRM
L3_105_000M1_scaffold_237_46
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55130..55873)
DNA (744bp) protein (248aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCC1_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDC67349.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_105_000M1_scaffold_237_47
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56620..58083
DNA (1464bp) protein (488aa)
Serine protease Do-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1L3_9FIRM
Serine protease Do-like protein {ECO:0000313|EMBL:CDC67348.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative serine protease
L3_105_000M1_scaffold_237_48
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58303..58671
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U964_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67347.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_105_000M1_scaffold_237_49
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58673..59890
DNA (1218bp) protein (406aa)
Aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I/II n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THK0_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDC67346.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_105_000M1_scaffold_237_50
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59972..60742
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T544_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67345.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_105_000M1_scaffold_237_51
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60896..62218)
DNA (1323bp) protein (441aa)
ABC-2 type transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCB5_9FIRM
ABC transporter membrane component
ABC transporter membrane component {ECO:0000313|EMBL:CCO03768.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_52
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62205..62945)
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1K5_9FIRM
ABC transporter ATPase component
ABC transporter ATPase component {ECO:0000313|EMBL:CCO03767.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_53
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63661..65295
DNA (1635bp) protein (545aa)
Endoglucanase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U957_9FIRM
Endoglucanase {ECO:0000313|EMBL:CDC67342.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glycoside Hydrolase Family 5 protein
L3_105_000M1_scaffold_237_54
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65432..66403)
DNA (972bp) protein (324aa)
cobD; Adenosylcobinamide-phosphate synthase CobD (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THJ5_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_55
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66627..67688)
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hisC; Histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T540_9FIRM
L3_105_000M1_scaffold_237_56
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67779..69908)
DNA (2130bp) protein (710aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCB0_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO03763.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
sig2; RNA polymerase sigma factor
L3_105_000M1_scaffold_237_57
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70145..71908)
DNA (1764bp) protein (588aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1K0_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO03762.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
sig1; RNA polymerase sigma factor
L3_105_000M1_scaffold_237_58
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72049..72663)
DNA (615bp) protein (205aa)
Radical SAM domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U952_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDC67337.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_105_000M1_scaffold_237_59
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72791..74044)
DNA (1254bp) protein (418aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
proA; Gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THJ0_9FIRM
L3_105_000M1_scaffold_237_60
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74050..74886)
DNA (837bp) protein (279aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glutamate 5-kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T537_9FIRM
Displaying items 31-60 of 71 in total

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