ggKbase home page

L3_105_000M1_scaffold_237

Search features with annotation key words

Displaying items 61-71 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_237_61
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74867..75823)
DNA (957bp) protein (319aa)
conserved hypothetical protein (EC:1.1.1.29)
Putative glycerate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCA4_9FIRM
Putative glycerate dehydrogenase {ECO:0000313|EMBL:CDC67334.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_105_000M1_scaffold_237_62
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75820..76161)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1J4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03757.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_63
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76350..76901)
DNA (552bp) protein (184aa)
Rubredoxin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U947_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03756.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_64
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77197..77646
DNA (450bp) protein (150aa)
C_GCAxxG_C_C family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THI4_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CDC67331.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_105_000M1_scaffold_237_65
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77719..79197)
DNA (1479bp) protein (493aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
guaB; Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T534_9FIRM
L3_105_000M1_scaffold_237_66
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79450..80784)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U930_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO03753.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_67
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81045..81740
DNA (696bp) protein (232aa)
DNA repair protein radc n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THG6_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03752.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_237_68
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81798..82778)
DNA (981bp) protein (327aa)
Protein-export membrane protein SecF n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T520_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
secF; Protein-export membrane protein SecF
L3_105_000M1_scaffold_237_69
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82771..84153)
DNA (1383bp) protein (461aa)
Protein translocase subunit SecD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC88_9FIRM
Export membrane protein SecD {ECO:0000313|EMBL:CDC67314.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
secD; Protein-export membrane protein SecD
L3_105_000M1_scaffold_237_70
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84469..85752
DNA (1284bp) protein (428aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:CCO03749.1}; EC=6.1.1.11 {ECO:0000313|EMBL:CCO03749.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1G7_9FIRM
L3_105_000M1_scaffold_237_71
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(85923..88244)
DNA (2322bp) protein (774aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U924_9FIRM
Displaying items 61-71 of 71 in total

View Taxonomy