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L3_105_000M1_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_252_1
unknown

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)

This feature has no annotations

L3_105_000M1_scaffold_252_2
unknown

Not on your lists

comp(534..1889)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F495B2
L3_105_000M1_scaffold_252_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2243..3061)
DNA (819bp) protein (273aa)
elongation factor Ts n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DB7640
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Translation elongation factor Ts
L3_105_000M1_scaffold_252_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3088..3948)
DNA (861bp) protein (287aa)
30S ribosomal protein S2 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9C3_9BACT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
30S ribosomal protein S2
L3_105_000M1_scaffold_252_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4117..4509)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9C4_9BACT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
30S ribosomal protein S9
L3_105_000M1_scaffold_252_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4509..4964)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Alistipes sp. AP11 RepID=UPI000306B38E
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
50S ribosomal protein L13
L3_105_000M1_scaffold_252_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5300..7495)
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GNB3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA90927.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
hypothetical protein
L3_105_000M1_scaffold_252_8
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7667..8173)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000306E85A
Uncharacterized protein {ECO:0000313|EMBL:EKU91029.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
hypothetical protein
L3_105_000M1_scaffold_252_9
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8187..8726)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EBB566
Uncharacterized protein {ECO:0000313|EMBL:CCX76258.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
5-nitroimidazole antibiotic resistance protein
L3_105_000M1_scaffold_252_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8924..10966
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D911ED
Uncharacterized protein {ECO:0000313|EMBL:EOS13253.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_252_11
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11162..11338
DNA (177bp) protein (59aa)
Histone H1-like protein Hc1 n=1 Tax=Alistipes sp. AP11 RepID=UPI000316467A
Histone H1-like protein Hc1.
Histone H1 {ECO:0000313|EMBL:KGO93913.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
L3_105_000M1_scaffold_252_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11430..12293)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H5P3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93482.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative sugar nucleotide epimerase
L3_105_000M1_scaffold_252_13
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12290..12721)
DNA (432bp) protein (144aa)
Pyrimidine dimer DNA glycosylase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RSX7_SPITD
pyrimidine dimer DNA glycosylase
Pyrimidine dimer DNA glycosylase {ECO:0000313|EMBL:ADN02114.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
L3_105_000M1_scaffold_252_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12772..15213
DNA (2442bp) protein (814aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8R4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91951.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
TonB-dependent receptor plug
L3_105_000M1_scaffold_252_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15286..16152
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EC489A
Uncharacterized protein {ECO:0000313|EMBL:EHB92271.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative xylanase
L3_105_000M1_scaffold_252_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16175..17065
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F62E14
Uncharacterized protein {ECO:0000313|EMBL:EHB92271.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative xylanase
L3_105_000M1_scaffold_252_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17201..18175
DNA (975bp) protein (325aa)
deoxyhypusine synthase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DFCB34
Uncharacterized protein {ECO:0000313|EMBL:EHB92203.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
deoxyhypusine synthase
L3_105_000M1_scaffold_252_18
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18491..18760
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DMC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE22191.1}; TaxID=1235813 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 10003.;"
L3_105_000M1_scaffold_252_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18826..19140)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9G2_9BACT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
thioredoxin
L3_105_000M1_scaffold_252_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19290..22910)
DNA (3621bp) protein (1207aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA polymerase III subunit alpha n=1 Tax=Alistipes sp. AP11 RepID=UPI000377FE8F
DNA polymerase III subunit alpha
L3_105_000M1_scaffold_252_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23087..23353
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031C8621
Uncharacterized protein {ECO:0000313|EMBL:EHB92202.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_252_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23374..24189)
DNA (816bp) protein (272aa)
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6B5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93209.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_252_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24197..24814)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030DBFEE
Uncharacterized protein {ECO:0000313|EMBL:EHB93210.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_252_24
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24814..25887)
DNA (1074bp) protein (358aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FCBD2D
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EHB93211.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_252_25
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25953..27419)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000382E9BC
Uncharacterized protein {ECO:0000313|EMBL:EHB93212.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_252_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27585..28586
DNA (1002bp) protein (334aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F89BF8
L3_105_000M1_scaffold_252_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28589..29938
DNA (1350bp) protein (450aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DFE180
tRNA(Ile)-lysidine synthetase
L3_105_000M1_scaffold_252_28
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30182..30742
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F815D0
Uncharacterized protein {ECO:0000313|EMBL:CCZ98257.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
hypothetical protein
L3_105_000M1_scaffold_252_29
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30760..31383
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031B1720
WbqC-like protein {ECO:0000313|EMBL:CCZ98857.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
hypothetical protein
L3_105_000M1_scaffold_252_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31400..33403)
DNA (2004bp) protein (668aa)
Beta-galactosidase (EC:3.2.1.23)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003096D8C
Uncharacterized protein {ECO:0000313|EMBL:EHB93357.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Displaying items 1-30 of 77 in total

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