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L3_105_000M1_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_338_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(85..342)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94697.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_105_000M1_scaffold_338_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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466..1143
DNA (678bp) protein (226aa)
Endopeptidase Clp n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXM7_9FIRM
Endopeptidase Clp {ECO:0000313|EMBL:CDB88444.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
peptidase S14 ClpP
L3_105_000M1_scaffold_338_3
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

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1204..2031
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI000377DCFF
bacitracin resistance protein BacA
L3_105_000M1_scaffold_338_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2045..4648
DNA (2604bp) protein (868aa)
FtsK/SpoIIIE family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MMW8_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CDB87117.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ftsK; cell division protein FtsK
L3_105_000M1_scaffold_338_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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4748..5350
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46937.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Thiamine transporter protein (Thia_YuaJ).
L3_105_000M1_scaffold_338_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

5636..6511
DNA (876bp) protein (292aa)
Stage III sporulation protein AA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY65_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CDB87056.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
spoIIIAA; stage III sporulation protein AA
L3_105_000M1_scaffold_338_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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6504..7013
DNA (510bp) protein (170aa)
Stage III sporulation protein AB n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ECS1_9FIRM
Stage III sporulation protein AB {ECO:0000313|EMBL:CCX90193.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
stage III sporulation protein AB
L3_105_000M1_scaffold_338_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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7017..7211
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWZ2_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:CCY41307.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
stage III sporulation protein AC
L3_105_000M1_scaffold_338_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

7212..7604
DNA (393bp) protein (131aa)
Putative stage III sporulation protein AD n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LHY4_9FIRM
Putative stage III sporulation protein AD {ECO:0000313|EMBL:CDB87053.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
stage III sporulation protein AD
L3_105_000M1_scaffold_338_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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7606..8697
DNA (1092bp) protein (364aa)
Stage III sporulation protein AE n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MMR3_9FIRM
Stage III sporulation protein AE {ECO:0000313|EMBL:CDB87052.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
spoIIIAE; putative stage III sporulation protein AE
L3_105_000M1_scaffold_338_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8694..9176
DNA (483bp) protein (161aa)
Stage III sporulation protein AF n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C725_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55978.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_105_000M1_scaffold_338_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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9186..9704
DNA (519bp) protein (173aa)
Translation initiation factor IF-2 n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HY17_9FIRM
Translation initiation factor IF-2 {ECO:0000313|EMBL:CDB30677.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
spoIIIAG; putative stage III sporulation protein AG
L3_105_000M1_scaffold_338_13
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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9718..10284
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90186.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
spoIIIAH; putative stage III sporulation protein AH
L3_105_000M1_scaffold_338_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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10387..10806
DNA (420bp) protein (140aa)
Alkaline shock protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX03_9FIRM
Alkaline shock protein {ECO:0000313|EMBL:CCY41317.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
alkaline shock protein
L3_105_000M1_scaffold_338_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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10883..11428
DNA (546bp) protein (182aa)
N utilization substance protein B homolog n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9S5_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
nusB; antitermination protein NusB
L3_105_000M1_scaffold_338_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


11425..12354
DNA (930bp) protein (310aa)
Glycoprotease family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY56_9FIRM
Glycoprotease family protein {ECO:0000313|EMBL:CDB87046.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
peptidase M22 glycoprotease
L3_105_000M1_scaffold_338_17
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

12347..13555
DNA (1209bp) protein (403aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LMI2_9FIRM
L3_105_000M1_scaffold_338_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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13552..13788
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATY8_9FIRM
L3_105_000M1_scaffold_338_19
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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13775..14647
DNA (873bp) protein (291aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H1N3_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CDB30670.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_105_000M1_scaffold_338_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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14659..15618
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IZ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42046.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_105_000M1_scaffold_338_21
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(15666..16700)
DNA (1035bp) protein (345aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CC81_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:CDA62947.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_105_000M1_scaffold_338_22
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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17746..18345
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EB19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX89840.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_105_000M1_scaffold_338_23
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18367..20217
DNA (1851bp) protein (617aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY52_9FIRM
L3_105_000M1_scaffold_338_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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20207..21010
DNA (804bp) protein (268aa)
Hemolysin TlyA family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGR4_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:CCY41333.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative hemolysin
L3_105_000M1_scaffold_338_25
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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21014..21871
DNA (858bp) protein (286aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAG2_9FIRM
L3_105_000M1_scaffold_338_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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21881..22333
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY6_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
argR; arginine repressor
L3_105_000M1_scaffold_338_27
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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22343..23998
DNA (1656bp) protein (552aa)
DNA repair protein RecN n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYJ8_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
recN; DNA repair protein RecN
L3_105_000M1_scaffold_338_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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24312..25538
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWD3_9FIRM
tyrosyl-tRNA synthetase
L3_105_000M1_scaffold_338_29
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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25532..25993
DNA (462bp) protein (154aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EET5_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCX89849.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
acetyltransferase
L3_105_000M1_scaffold_338_30
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(26218..27207)
DNA (990bp) protein (330aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
6-phosphofructokinase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ECL5_9FIRM
6-phosphofructokinase
Displaying items 1-30 of 66 in total

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