ggKbase home page

L3_105_000M1_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_344_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(715..2436)
DNA (1722bp) protein (574aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NNQ7_BACSE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS15583.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
AraC-type DNA-binding domain-containing proteins
L3_105_000M1_scaffold_344_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2543..4183
DNA (1641bp) protein (547aa)
Radical SAM domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NNQ6_BACSE
Radical SAM domain protein {ECO:0000313|EMBL:EDS15582.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Fe-S oxidoreductase
L3_105_000M1_scaffold_344_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5423..6703
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=K9E3K2_9BACE
integrase
Integrase {ECO:0000313|EMBL:AHF12475.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_105_000M1_scaffold_344_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7336..7983
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B4Z0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EYE46503.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_105_000M1_scaffold_344_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7994..9013
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=C3RGS4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ45663.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_105_000M1_scaffold_344_6
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9279..9545
DNA (267bp) protein (89aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C3RGS5_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40911.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_105_000M1_scaffold_344_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9545..10636
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B4Y7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98503.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
mobilization protein
L3_105_000M1_scaffold_344_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10851..11810
DNA (960bp) protein (320aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3RGS7_9BACE
Toprim-like family protein {ECO:0000313|EMBL:EYE46498.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
DNA primase
L3_105_000M1_scaffold_344_9
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12282..13454
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IQ40_9BACE
mobilization protein
Uncharacterized protein {ECO:0000313|EMBL:EES66849.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_105_000M1_scaffold_344_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14342..14854)
DNA (513bp) protein (171aa)
Lincosamide resistance family protein n=1 Tax=Bacteroides sp. D20 RepID=D2F0C3_9BACE
Lincosamide resistance family protein {ECO:0000313|EMBL:EFA19591.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
lincosamide resistance protein
L3_105_000M1_scaffold_344_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14879..16084)
DNA (1206bp) protein (402aa)
Transporter, major facilitator family protein n=12 Tax=root RepID=B7BAC8_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98415.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_000M1_scaffold_344_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17141..18223
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E316FE
Uncharacterized protein {ECO:0000313|EMBL:CDE63573.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_105_000M1_scaffold_344_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18245..19129
DNA (885bp) protein (295aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
ferredoxin-NADP(+) reductase subunit alpha n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035EDA67
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:CDD25762.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_344_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19153..20541
DNA (1389bp) protein (463aa)
NADPH-dependent glutamate synthase (EC:1.8.1.-)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031A9DB4
NADPH-dependent glutamate synthase homotetrameric {ECO:0000313|EMBL:CCZ76589.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_105_000M1_scaffold_344_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20585..21166
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035FDD7F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77230.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_344_16
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21321..23153
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003141E02
Uncharacterized protein {ECO:0000313|EMBL:CDD00378.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
endonuclease
L3_105_000M1_scaffold_344_17
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23165..23548
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000318242A
Uncharacterized protein {ECO:0000313|EMBL:CDD00379.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
hypothetical protein
L3_105_000M1_scaffold_344_18
unknown

Not on your lists

comp(23826..24260)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_105_000M1_scaffold_344_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24452..25792
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036DF97E
Glycerol dehydrogenase and related enzymes
Glycerol dehydrogenase and related enzymes {ECO:0000313|EMBL:CCZ97532.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_105_000M1_scaffold_344_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26124..27806
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031E8810
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EFR58996.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_105_000M1_scaffold_344_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27894..28901)
DNA (1008bp) protein (336aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000301816E
L3_105_000M1_scaffold_344_22
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28927..29877)
DNA (951bp) protein (317aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphate acyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003768DA3
phosphate:acyl-[acyl carrier protein] acyltransferase
L3_105_000M1_scaffold_344_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(29960..30145)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000303CCE2
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L32
L3_105_000M1_scaffold_344_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30180..30752)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037C986F
Putative metal-binding protein possibly nucleic-acid binding protein {ECO:0000313|EMBL:CDD25656.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L3_105_000M1_scaffold_344_25
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31111..31533
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036EA4E2
Uncharacterized protein {ECO:0000313|EMBL:CCZ77025.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_105_000M1_scaffold_344_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31609..32040)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FA21E0
DoxX family protein {ECO:0000313|EMBL:CDE63645.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_105_000M1_scaffold_344_27

Not on your lists

comp(32045..32317)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000369E888
Histone-like bacterial DNA-binding protein {ECO:0000313|EMBL:EKC46356.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
nucleoid DNA-binding protein
L3_105_000M1_scaffold_344_28
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32569..34026)
DNA (1458bp) protein (486aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
adenylosuccinate lyase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000364B827
adenylosuccinate lyase
L3_105_000M1_scaffold_344_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34023..34745)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000309383C
YjeF-like protein
YhhN-like protein {ECO:0000313|EMBL:EFR56412.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_105_000M1_scaffold_344_30
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34732..36018)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DC504E
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:CCZ43445.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
Displaying items 1-30 of 75 in total

View Taxonomy