ggKbase home page

L3_105_000M1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_391_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

107..595
DNA (489bp) protein (163aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V261_BACUN
L3_105_000M1_scaffold_391_2
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(598..1074)
DNA (477bp) protein (159aa)
Transcriptional regulator, AsnC family n=8 Tax=Bacteroides RepID=A7V262_BACUN
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGF58578.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
AsnC family transcriptional regulator
L3_105_000M1_scaffold_391_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1314..2591
DNA (1278bp) protein (426aa)
IgA Peptidase M64 n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V264_BACUN
IgA Peptidase M64 {ECO:0000313|EMBL:EDO54670.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
IgA peptidase
L3_105_000M1_scaffold_391_4
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2616..3152
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=3 Tax=Bacteroides RepID=A7V265_BACUN
Acetyltransferase {ECO:0000313|EMBL:EFV26076.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
GCN5-related N-acetyltransferase
L3_105_000M1_scaffold_391_5
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3228..3692)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=root RepID=A7V266_BACUN
Biopolymer transporter ExbD/TolR {ECO:0000313|EMBL:EFV26077.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Biopolymer transport protein ExbD/TolR
L3_105_000M1_scaffold_391_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3692..4282)
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=root RepID=A7V267_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA19239.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Biopolymer transport protein ExbD/TolR
L3_105_000M1_scaffold_391_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4319..4804)
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V268_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA19238.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_105_000M1_scaffold_391_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4810..5613)
DNA (804bp) protein (268aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=2 Tax=Bacteroides uniformis RepID=A7V269_BACUN
Transporter, MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:EDO54675.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
MotA/TolQ/ExbB proton channel
L3_105_000M1_scaffold_391_9
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5637..5834)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7E8Y7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD99384.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_105_000M1_scaffold_391_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5895..6674)
DNA (780bp) protein (260aa)
Hydrolase, TatD family n=2 Tax=Bacteroides uniformis RepID=A7V271_BACUN
Hydrolase, TatD family {ECO:0000313|EMBL:EDO54677.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hydrolase, TatD family
L3_105_000M1_scaffold_391_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6683..7384)
DNA (702bp) protein (234aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V272_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26082.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_105_000M1_scaffold_391_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7403..8443)
DNA (1041bp) protein (347aa)
Polyprenyl synthetase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V273_BACUN
Polyprenyl synthetase {ECO:0000313|EMBL:EDO54679.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
polyprenyl synthetase
L3_105_000M1_scaffold_391_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8458..9144)
DNA (687bp) protein (229aa)
TonB-dependent receptor n=4 Tax=Bacteroides RepID=A7V274_BACUN
TonB family domain-containing protein {ECO:0000313|EMBL:EOS08459.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
outer membrane transport energization protein TonB
L3_105_000M1_scaffold_391_14
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9329..10102
DNA (774bp) protein (258aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7E9J6_9BACE
L3_105_000M1_scaffold_391_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10110..10976
DNA (867bp) protein (289aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=6 Tax=root RepID=A7V276_BACUN
L3_105_000M1_scaffold_391_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11116..12096
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=6 Tax=Bacteroides RepID=A7V277_BACUN
L3_105_000M1_scaffold_391_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12157..12996)
DNA (840bp) protein (280aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=root RepID=A7V278_BACUN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDO54684.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
short-chain dehydrogenase/reductase SDR
L3_105_000M1_scaffold_391_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13033..14256)
DNA (1224bp) protein (408aa)
NADPH dehydrogenase (EC:1.6.99.1)
Oxidoreductase, FAD/FMN-binding protein n=2 Tax=root RepID=A7V279_BACUN
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EDO54685.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L3_105_000M1_scaffold_391_19
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14329..15099)
DNA (771bp) protein (257aa)
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase n=6 Tax=root RepID=A7V280_BACUN
3-oxo-5-alpha-steroid 4-dehydrogenase {ECO:0000313|EMBL:EFV26090.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_105_000M1_scaffold_391_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15346..16689)
DNA (1344bp) protein (448aa)
Citrate synthase n=2 Tax=Bacteroides RepID=A7V282_BACUN
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Citrate synthase
L3_105_000M1_scaffold_391_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16702..17862)
DNA (1161bp) protein (387aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=3 Tax=Bacteroides RepID=A7V283_BACUN
L3_105_000M1_scaffold_391_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17866..20109)
DNA (2244bp) protein (748aa)
Aconitate hydratase {ECO:0000313|EMBL:EDO54690.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EDO54690.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V284_BACUN
L3_105_000M1_scaffold_391_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20224..22137
DNA (1914bp) protein (638aa)
Putative DNA helicase n=2 Tax=Bacteroides RepID=A7V285_BACUN
Putative DNA helicase {ECO:0000313|EMBL:EDO54691.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
helicase
L3_105_000M1_scaffold_391_24
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22199..24001)
DNA (1803bp) protein (601aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Bacteroides RepID=A7V286_BACUN
L3_105_000M1_scaffold_391_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23998..24558)
DNA (561bp) protein (187aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=5 Tax=Bacteroides RepID=A7V288_BACUN
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EOS08472.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L3_105_000M1_scaffold_391_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24591..26342)
DNA (1752bp) protein (584aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EDO54695.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDO54695.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V289_BACUN
L3_105_000M1_scaffold_391_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26434..28236)
DNA (1803bp) protein (601aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=4 Tax=Bacteroides RepID=I8ZZ75_BACUN
L3_105_000M1_scaffold_391_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28727..29299
DNA (573bp) protein (191aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides uniformis RepID=A7V293_BACUN
peptidylprolyl isomerase FKBP-type
L3_105_000M1_scaffold_391_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29399..30679)
DNA (1281bp) protein (427aa)
UPF0597 protein BACUNI_01684 n=2 Tax=Bacteroides uniformis RepID=A7V294_BACUN
UPF0597 protein BACUNI_01684 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
serine dehydratase subunit alpha
L3_105_000M1_scaffold_391_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30826..31578)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HWV0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO54701.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative exported lipoprotein
Displaying items 1-30 of 84 in total

View Taxonomy