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L3_105_000M1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_404_1
unknown

Not on your lists

comp(84..527)
DNA (444bp) protein (148aa)

This feature has no annotations

L3_105_000M1_scaffold_404_2
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(543..1883)
DNA (1341bp) protein (447aa)
wapA2; tRNA3(Ser)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein (Fragment) n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I745_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA81688.1}; Flags: Fragment;; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
L3_105_000M1_scaffold_404_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1861..6630)
DNA (4770bp) protein (1590aa)
wapA1; tRNA(Glu)-specific nuclease WapA (EC:3.1.-.-)
Putative cell wall associated protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHN0_CLOPA
Putative cell wall associated protein/ RHS repeat family {ECO:0000313|EMBL:AEB75043.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L3_105_000M1_scaffold_404_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6657..7100)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NS69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11269.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8597..9112)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11485.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_404_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9134..9436)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NSY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11484.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9645..10055
DNA (411bp) protein (137aa)
Putative Xre family transcriptional regulator n=1 Tax=Clostridium sp. CAG:413 RepID=R6NH48_9CLOT
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:CDC11483.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
putative Xre family transcriptional regulator
L3_105_000M1_scaffold_404_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10063..10431
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11482.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10465..10992
DNA (528bp) protein (176aa)
Predicted Zn peptidase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYZ1_9CLOT
Predicted Zn peptidase {ECO:0000313|EMBL:CDC11481.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Predicted Zn peptidase
L3_105_000M1_scaffold_404_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10993..11493
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11480.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_11
unknown

Not on your lists

12263..12502
DNA (240bp) protein (80aa)

This feature has no annotations

L3_105_000M1_scaffold_404_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12987..14093
DNA (1107bp) protein (369aa)
Plasmid recombination enzyme n=1 Tax=Clostridium sp. CAG:413 RepID=R6NSX5_9CLOT
Plasmid recombination enzyme {ECO:0000313|EMBL:CDC11479.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_404_13

Not on your lists

comp(14161..14541)
DNA (381bp) protein (127aa)
XRE family transcriptional regulator n=1 Tax=human gut metagenome RepID=K1URT4_9ZZZZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EKC74191.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Helix-turn-helix.
L3_105_000M1_scaffold_404_14
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14894..22600)
DNA (7707bp) protein (2569aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11477.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_15
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22654..23397)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11476.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_16
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23369..24070)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11475.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_17
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24130..26622)
DNA (2493bp) protein (831aa)
Orf26 family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NSX0_9CLOT
Orf26 family protein {ECO:0000313|EMBL:CDC11474.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
TrsE protein
L3_105_000M1_scaffold_404_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26626..27045)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NH40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11473.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_404_19
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27065..28093)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11472.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_20
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28205..28582)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11471.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_21
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28665..30854)
DNA (2190bp) protein (730aa)
TraG/TraD family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJS9_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:CDC11470.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
conjugal transfer protein TraG
L3_105_000M1_scaffold_404_22
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30861..32243)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NSW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11469.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_23
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32327..33097)
DNA (771bp) protein (257aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
DNA modification methylase (EC:2.1.1.72)
Modification methylase DpnIIB n=1 Tax=Clostridium sp. CAG:413 RepID=R6NH34_9CLOT
L3_105_000M1_scaffold_404_24
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33229..33963)
DNA (735bp) protein (245aa)
SCP-like extracellular n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNV9_9CLOT
SCP-like extracellular {ECO:0000313|EMBL:CDC11467.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_25
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34387..35127)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BK06_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42072.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_105_000M1_scaffold_404_26
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35294..36025)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11466.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_404_27
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36309..37067
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11465.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_404_28
unknown

Not on your lists

37357..37818
DNA (462bp) protein (154aa)

This feature has no annotations

L3_105_000M1_scaffold_404_29
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

37790..38731
DNA (942bp) protein (314aa)
ribulose 1,5-bisphosphate carboxylase small subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase small chain n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UE16_9CYAN
Ribulose bisphosphate carboxylase small chain {ECO:0000313|EMBL:EGK89354.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
L3_105_000M1_scaffold_404_30
unknown

Not on your lists

38750..39274
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

View Taxonomy